Information for 2-GGCCGWTTGC (Motif 5)

A T C G A T C G T G A C G T A C A T C G G C T A A G C T A G C T A T C G G T A C
Reverse Opposite:
A C T G A T G C T C G A T C G A C G A T T A G C A C T G A C T G A T G C T A G C
p-value:1e-12
log p-value:-2.841e+01
Information Content per bp:1.643
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.36%
Number of Background Sequences with motif145.0
Percentage of Background Sequences with motif0.30%
Average Position of motif in Targets62.5 +/- 23.6bp
Average Position of motif in Background50.7 +/- 31.1bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GGCCGWTTGC
TGGCAGTTGG-
 A C G T A T C G A T C G T G A C G T A C A T C G G C T A A G C T A G C T A T C G G T A C
G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G A C G T

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:2
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GGCCGWTTGC
GGCVGTTR--
 A T C G A T C G T G A C G T A C A T C G G C T A A G C T A G C T A T C G G T A C
C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A A C G T A C G T

PB0149.1_Myb_2/Jaspar

Match Rank:3
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GGCCGWTTGC--
NNNTGGCAGTTGGTNN
 A C G T A C G T A C G T A C G T A T C G A T C G T G A C G T A C A T C G G C T A A G C T A G C T A T C G G T A C A C G T A C G T
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G

PB0150.1_Mybl1_2/Jaspar

Match Rank:4
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GGCCGWTTGC--
CACGGCAGTTGGTNN
 A C G T A C G T A C G T A T C G A T C G T G A C G T A C A T C G G C T A A G C T A G C T A T C G G T A C A C G T A C G T
T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GGCCGWTTGC
BRRCVGTTDN-
 A C G T A T C G A T C G T G A C G T A C A T C G G C T A A G C T A G C T A T C G G T A C
A G C T C T A G C T A G A G T C T G C A A C T G A C G T C G A T C G T A T C A G A C G T

MTF1/MA0863.1/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GGCCGWTTGC---
GTGCCGTGTGCAAA
 A C G T A T C G A T C G T G A C G T A C A T C G G C T A A G C T A G C T A T C G G T A C A C G T A C G T A C G T
C T A G A C G T C T A G G T A C G A T C A C T G A C G T A C T G G A C T A C T G A G T C C G T A T G C A G T C A

Myb/MA0100.2/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GGCCGWTTGC
TGGCAGTTGN-
 A C G T A T C G A T C G T G A C G T A C A T C G G C T A A G C T A G C T A T C G G T A C
C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G A C G T

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GGCCGWTTGC---
CTTGGCANNNTGCCAA
 A C G T A C G T A C G T A T C G A T C G T G A C G T A C A T C G G C T A A G C T A G C T A T C G G T A C A C G T A C G T A C G T
A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

PB0044.1_Mtf1_1/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GGCCGWTTGC-----
GGGCCGTGTGCAAAAA
 A C G T A T C G A T C G T G A C G T A C A T C G G C T A A G C T A G C T A T C G G T A C A C G T A C G T A C G T A C G T A C G T
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:10
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---GGCCGWTTGC
CTAGGCCT-----
 A C G T A C G T A C G T A T C G A T C G T G A C G T A C A T C G G C T A A G C T A G C T A T C G G T A C
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T