Information for 18-AGGATAAGCAGGG (Motif 28)

C T G A A C T G A C T G C G T A A C G T T C G A T C G A A C T G T G A C C T G A A C T G C T A G A C T G
Reverse Opposite:
A G T C A G T C A G T C A G C T A C T G G T A C A C G T A G C T G T C A C G A T A G T C G T A C A G C T
p-value:1e-7
log p-value:-1.663e+01
Information Content per bp:1.777
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.39%
Number of Background Sequences with motif92.9
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets38.2 +/- 27.9bp
Average Position of motif in Background50.7 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:1
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-AGGATAAGCAGGG-
AAGGKGRCGCAGGCA
 A C G T C T G A A C T G A C T G C G T A A C G T T C G A T C G A A C T G T G A C C T G A A C T G C T A G A C T G A C G T
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AGGATAAGCAGGG
TGACANARRCCAGRC
 A C G T A C G T C T G A A C T G A C T G C G T A A C G T T C G A T C G A A C T G T G A C C T G A A C T G C T A G A C T G
C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AGGATAAGCAGGG
TGGAACAGMA---
 C T G A A C T G A C T G C G T A A C G T T C G A T C G A A C T G T G A C C T G A A C T G C T A G A C T G
C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T A C G T A C G T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:4
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---AGGATAAGCAGGG
NDCAGGAARTNN----
 A C G T A C G T A C G T C T G A A C T G A C T G C G T A A C G T T C G A T C G A A C T G T G A C C T G A A C T G C T A G A C T G
T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.53
Offset:3
Orientation:forward strand
Alignment:AGGATAAGCAGGG--
---CACAGCAGGGGG
 C T G A A C T G A C T G C G T A A C G T T C G A T C G A A C T G T G A C C T G A A C T G C T A G A C T G A C G T A C G T
A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:6
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:AGGATAAGCAGGG
--DCTCAGCAGG-
 C T G A A C T G A C T G C G T A A C G T T C G A T C G A A C T G T G A C C T G A A C T G C T A G A C T G
A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:7
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:AGGATAAGCAGGG
-GGATTAGC----
 C T G A A C T G A C T G C G T A A C G T T C G A T C G A A C T G T G A C C T G A A C T G C T A G A C T G
A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C A C G T A C G T A C G T A C G T

PH0139.1_Pitx3/Jaspar

Match Rank:8
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---AGGATAAGCAGGG
AGGGGGATTAGCTGCC
 A C G T A C G T A C G T C T G A A C T G A C T G C G T A A C G T T C G A T C G A A C T G T G A C C T G A A C T G C T A G A C T G
T C G A C T A G T A C G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C A T G A T G C A C G T C T A G A T G C A T G C

ZNF263/MA0528.1/Jaspar

Match Rank:9
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----AGGATAAGCAGGG---
GGAGGAGGAGGGGGAGGAGGA
 A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C T G C G T A A C G T T C G A T C G A A C T G T G A C C T G A A C T G C T A G A C T G A C G T A C G T A C G T
C T A G C T A G C T G A C A T G T A C G G C T A C A T G T C A G T C G A T C A G C T A G C T A G C T A G T C A G C T G A C T A G C T A G C T G A C T A G C T A G C T G A

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:AGGATAAGCAGGG
NAGATAAGNN---
 C T G A A C T G A C T G C G T A A C G T T C G A T C G A A C T G T G A C C T G A A C T G C T A G A C T G
T A C G G C T A A C T G C G T A A C G T C G T A C T G A T A C G T C A G T C G A A C G T A C G T A C G T