Information for 1-GACTTCTSCAGCCAGG (Motif 2)

C T A G C G T A A G T C A G C T A C G T A G T C A C G T A T C G A G T C C G T A A C T G A G T C A T G C G T C A A T C G T A C G
Reverse Opposite:
A T G C A T G C A C G T A T C G A C T G G T A C C G A T A C T G A T C G G T C A A C T G C G T A T C G A A C T G A C G T A G T C
p-value:1e-14
log p-value:-3.336e+01
Information Content per bp:1.810
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.8 +/- 14.6bp
Average Position of motif in Background62.0 +/- 17.5bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:1
Score:0.50
Offset:7
Orientation:reverse strand
Alignment:GACTTCTSCAGCCAGG------
-------SCAGYCADGCATGAC
 C T A G C G T A A G T C A G C T A C G T A G T C A C G T A T C G A G T C C G T A A C T G A G T C A T G C G T C A A T C G T A C G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

PB0058.1_Sfpi1_1/Jaspar

Match Rank:2
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-GACTTCTSCAGCCAGG
NNACTTCCTCTTNN---
 A C G T C T A G C G T A A G T C A G C T A C G T A G T C A C G T A T C G A G T C C G T A A C T G A G T C A T G C G T C A A T C G T A C G
C A G T G C T A C T G A A T G C C G A T C G A T A G T C A G T C A C G T A G T C G C A T G C A T G C T A T C G A A C G T A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:3
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--GACTTCTSCAGCCAGG
TTGACTTTT---------
 A C G T A C G T C T A G C G T A A G T C A G C T A C G T A G T C A C G T A T C G A G T C C G T A A C T G A G T C A T G C G T C A A T C G T A C G
C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:4
Score:0.48
Offset:-1
Orientation:reverse strand
Alignment:-GACTTCTSCAGCCAGG
TGACCYCT---------
 A C G T C T A G C G T A A G T C A G C T A C G T A G T C A C G T A T C G A G T C C G T A A C T G A G T C A T G C G T C A A T C G T A C G
A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:5
Score:0.48
Offset:-6
Orientation:reverse strand
Alignment:------GACTTCTSCAGCCAGG
NNNNTTGACCCCTNNNN-----
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G T A A G T C A G C T A C G T A G T C A C G T A T C G A G T C C G T A A C T G A G T C A T G C G T C A A T C G T A C G
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C A C G T A C G T A C G T A C G T A C G T

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:6
Score:0.48
Offset:2
Orientation:forward strand
Alignment:GACTTCTSCAGCCAGG
--VDTTTCCCGCCA--
 C T A G C G T A A G T C A G C T A C G T A G T C A C G T A T C G A G T C C G T A A C T G A G T C A T G C G T C A A T C G T A C G
A C G T A C G T T A G C C G A T A C G T A G C T A G C T A G T C A T G C A G T C A C T G A T G C A T G C G C T A A C G T A C G T

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:7
Score:0.47
Offset:0
Orientation:forward strand
Alignment:GACTTCTSCAGCCAGG----
RACTACAACTCCCAGVAKGC
 C T A G C G T A A G T C A G C T A C G T A G T C A C G T A T C G A G T C C G T A A C T G A G T C A T G C G T C A A T C G T A C G A C G T A C G T A C G T A C G T
T C A G C G T A A G T C A G C T C G T A A G T C C T G A C G T A A G T C G C A T A G T C A G T C A G T C C T G A A C T G T G C A T C G A C A T G A T C G G A T C

BATF3/MA0835.1/Jaspar

Match Rank:8
Score:0.47
Offset:-4
Orientation:reverse strand
Alignment:----GACTTCTSCAGCCAGG
TGATGACGTCATCA------
 A C G T A C G T A C G T A C G T C T A G C G T A A G T C A G C T A C G T A G T C A C G T A T C G A G T C C G T A A C T G A G T C A T G C G T C A A T C G T A C G
G A C T C A T G T C G A C G A T C A T G G T C A A G T C A C T G A C G T A G T C C G T A A G C T G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

ETV6/MA0645.1/Jaspar

Match Rank:9
Score:0.47
Offset:0
Orientation:reverse strand
Alignment:GACTTCTSCAGCCAGG
CACTTCCGCT------
 C T A G C G T A A G T C A G C T A C G T A G T C A C G T A T C G A G T C C G T A A C T G A G T C A T G C G T C A A T C G T A C G
G A T C T C G A A G T C G C A T A G C T G T A C G T A C A C T G T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:10
Score:0.47
Offset:9
Orientation:reverse strand
Alignment:GACTTCTSCAGCCAGG
---------TGCCAA-
 C T A G C G T A A G T C A G C T A C G T A G T C A C G T A T C G A G T C C G T A A C T G A G T C A T G C G T C A A T C G T A C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T