Information for 12-GCCCTCGGGCACT (Motif 19)

A C T G A T G C A G T C A G T C A C G T A G T C A C T G A C T G A C T G G T A C C G T A A G T C A C G T
Reverse Opposite:
C G T A A C T G A C G T A C T G T A G C A G T C A G T C A C T G C G T A A C T G A C T G A T C G A G T C
p-value:1e-9
log p-value:-2.103e+01
Information Content per bp:1.914
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.4 +/- 15.9bp
Average Position of motif in Background27.5 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2C/MA0524.2/Jaspar

Match Rank:1
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GCCCTCGGGCACT
TGCCCCAGGGCA--
 A C G T A C T G A T G C A G T C A G T C A C G T A G T C A C T G A C T G A C T G G T A C C G T A A G T C A C G T
G A C T T A C G T A G C G A T C A G T C A G T C T C G A T C A G C T A G T A C G A T G C C T G A A C G T A C G T

TFAP2B/MA0811.1/Jaspar

Match Rank:2
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GCCCTCGGGCACT
TGCCCCAGGGCA--
 A C G T A C T G A T G C A G T C A G T C A C G T A G T C A C T G A C T G A C T G G T A C C G T A A G T C A C G T
G A C T T A C G A T G C G A T C A G T C A G T C T C G A T C A G T C A G T A C G A T G C C T G A A C G T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:3
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GCCCTCGGGCACT
TGCCCCCGGGCA--
 A C G T A C T G A T G C A G T C A G T C A C G T A G T C A C T G A C T G A C T G G T A C C G T A A G T C A C G T
G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A A C G T A C G T

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:4
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--GCCCTCGGGCACT
NTGCCCTAGGGCAA-
 A C G T A C G T A C T G A T G C A G T C A G T C A C G T A G T C A C T G A C T G A C T G G T A C C G T A A G T C A C G T
C G T A G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A G C T A A C G T

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:5
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GCCCTCGGGCACT
NTGCCCTTGGGCGN-
 A C G T A C G T A C T G A T G C A G T C A G T C A C G T A G T C A C T G A C T G A C T G G T A C C G T A A G T C A C G T
G A T C G C A T T C A G G T A C G A T C G A T C C G A T G A C T C T A G C T A G C A T G A G T C C T A G T A C G A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GCCCTCGGGCACT
ATGCCCTGAGGC---
 A C G T A C G T A C T G A T G C A G T C A G T C A C G T A G T C A C T G A C T G A C T G G T A C C G T A A G T C A C G T
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:7
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GCCCTCGGGCACT
WTGSCCTSAGGS---
 A C G T A C G T A C T G A T G C A G T C A G T C A C G T A G T C A C T G A C T G A C T G G T A C C G T A A G T C A C G T
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C A C G T A C G T A C G T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GCCCTCGGGCACT
NTCGCCTCAGGCAAT
 A C G T A C G T A C T G A T G C A G T C A G T C A C G T A G T C A C T G A C T G A C T G G T A C C G T A A G T C A C G T
G C A T C G A T G A T C A T C G G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A G C C T G A C G T A C G A T

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GCCCTCGGGCACT
NTCCCCTCAGGGANT
 A C G T A C G T A C T G A T G C A G T C A G T C A C G T A G T C A C T G A C T G A C T G G T A C C G T A A G T C A C G T
G A C T C G A T G A T C A T G C G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A C G C G T A G C T A G C A T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GCCCTCGGGCACT
--GCTCGGSCTC-
 A C T G A T G C A G T C A G T C A C G T A G T C A C T G A C T G A C T G G T A C C G T A A G T C A C G T
A C G T A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T