Information for 6-KCAGAGCTCC (Motif 16)

A C G T A T G C C G T A C T A G T G C A A C T G A G T C G C A T A T G C A G T C
Reverse Opposite:
C T A G A T C G C G T A A C T G G T A C A C G T A G T C G A C T A T C G T G C A
p-value:1e-9
log p-value:-2.267e+01
Information Content per bp:1.770
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif4.28%
Number of Background Sequences with motif620.7
Percentage of Background Sequences with motif1.30%
Average Position of motif in Targets35.2 +/- 22.8bp
Average Position of motif in Background48.9 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)-1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0099.1_Zfp691_1/Jaspar

Match Rank:1
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---KCAGAGCTCC----
CGAACAGTGCTCACTAT
 A C G T A C G T A C G T A C G T A T G C C G T A C T A G T G C A A C T G A G T C G C A T A T G C A G T C A C G T A C G T A C G T A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.68
Offset:5
Orientation:forward strand
Alignment:KCAGAGCTCC-
-----GCTCCG
 A C G T A T G C C G T A C T A G T G C A A C T G A G T C G C A T A T G C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.60
Offset:3
Orientation:forward strand
Alignment:KCAGAGCTCC
---CAGCC--
 A C G T A T G C C G T A C T A G T G C A A C T G A G T C G C A T A T G C A G T C
A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.58
Offset:1
Orientation:forward strand
Alignment:KCAGAGCTCC-
-CNGTCCTCCC
 A C G T A T G C C G T A C T A G T G C A A C T G A G T C G C A T A T G C A G T C A C G T
A C G T A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---KCAGAGCTCC
ACATCAAAGG---
 A C G T A C G T A C G T A C G T A T G C C G T A C T A G T G C A A C T G A G T C G C A T A T G C A G T C
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:6
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----KCAGAGCTCC
AGAGTCCAAAGTCCA
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G T A C T A G T G C A A C T G A G T C G C A T A T G C A G T C
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:7
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----KCAGAGCTCC
GAGGTCAAAGGTCA
 A C G T A C G T A C G T A C G T A C G T A T G C C G T A C T A G T G C A A C T G A G T C G C A T A T G C A G T C
T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A

NHLH1/MA0048.2/Jaspar

Match Rank:8
Score:0.53
Offset:1
Orientation:forward strand
Alignment:KCAGAGCTCC-
-CGCAGCTGCG
 A C G T A T G C C G T A C T A G T G C A A C T G A G T C G C A T A T G C A G T C A C G T
A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:9
Score:0.53
Offset:-6
Orientation:forward strand
Alignment:------KCAGAGCTCC
CANAGNNCAAAGTCCA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G T A C T A G T G C A A C T G A G T C G C A T A T G C A G T C
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A

NR2C2/MA0504.1/Jaspar

Match Rank:10
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----KCAGAGCTCC
AGGGGTCAGAGGTCA
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G T A C T A G T G C A A C T G A G T C G C A T A T G C A G T C
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A