Information for 4-GTCAGTGTGTGARGVD (Motif 8)

A C T G C G A T T G A C G C T A A T C G A C G T T A C G A C G T C T A G C A G T T A C G C G T A T C A G T C A G T A C G C T A G
Reverse Opposite:
G A T C A T C G A G T C A G T C G C A T A G T C G T C A A G T C C G T A A G T C G T C A T A G C C G A T A C T G C G T A T G A C
p-value:1e-7
log p-value:-1.815e+01
Information Content per bp:1.634
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif6.98%
Number of Background Sequences with motif84.8
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets53.6 +/- 26.4bp
Average Position of motif in Background45.8 +/- 38.5bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GTCAGTGTGTGARGVD
NNGCGTGTGTGCNGCN
 A C T G C G A T T G A C G C T A A T C G A C G T T A C G A C G T C T A G C A G T T A C G C G T A T C A G T C A G T A C G C T A G
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:2
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GTCAGTGTGTGARGVD
GTAGGTCACTGGGTCA----
 A C G T A C G T A C G T A C G T A C T G C G A T T G A C G C T A A T C G A C G T T A C G A C G T C T A G C A G T T A C G C G T A T C A G T C A G T A C G C T A G
A T C G A G C T C T G A C T A G A C T G A C G T G T A C G C T A A T G C A C G T C T A G C A T G T A C G C G A T A T G C C G T A A C G T A C G T A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GTCAGTGTGTGARGVD
NNNCCATTGTGTNAN---
 A C G T A C G T A C T G C G A T T G A C G C T A A T C G A C G T T A C G A C G T C T A G C A G T T A C G C G T A T C A G T C A G T A C G C T A G
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G A C G T A C G T A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:4
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GTCAGTGTGTGARGVD
---AAGGTGTKAA---
 A C T G C G A T T G A C G C T A A T C G A C G T T A C G A C G T C T A G C A G T T A C G C G T A T C A G T C A G T A C G C T A G
A C G T A C G T A C G T C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T A C G T A C G T

TBX21/MA0690.1/Jaspar

Match Rank:5
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GTCAGTGTGTGARGVD
---AAGGTGTGAA---
 A C T G C G A T T G A C G C T A A T C G A C G T T A C G A C G T C T A G C A G T T A C G C G T A T C A G T C A G T A C G C T A G
A C G T A C G T A C G T C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A A C G T A C G T A C G T

TBX20/MA0689.1/Jaspar

Match Rank:6
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GTCAGTGTGTGARGVD
---TAGGTGTGAAG--
 A C T G C G A T T G A C G C T A A T C G A C G T T A C G A C G T C T A G C A G T T A C G C G T A T C A G T C A G T A C G C T A G
A C G T A C G T A C G T C G A T C T G A T C A G A C T G A C G T A C T G C A G T C A T G C G T A C G T A T C A G A C G T A C G T

MGA/MA0801.1/Jaspar

Match Rank:7
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GTCAGTGTGTGARGVD
----AGGTGTGA----
 A C T G C G A T T G A C G C T A A T C G A C G T T A C G A C G T C T A G C A G T T A C G C G T A T C A G T C A G T A C G C T A G
A C G T A C G T A C G T A C G T C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A A C G T A C G T A C G T A C G T

TBX2/MA0688.1/Jaspar

Match Rank:8
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GTCAGTGTGTGARGVD
---AAGGTGTGAAA--
 A C T G C G A T T G A C G C T A A T C G A C G T T A C G A C G T C T A G C A G T T A C G C G T A T C A G T C A G T A C G C T A G
A C G T A C G T A C G T C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A A C G T A C G T

EOMES/MA0800.1/Jaspar

Match Rank:9
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GTCAGTGTGTGARGVD
---AAGGTGTGAAAAT
 A C T G C G A T T G A C G C T A A T C G A C G T T A C G A C G T C T A G C A G T T A C G C G T A T C A G T C A G T A C G C T A G
A C G T A C G T A C G T C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T

PB0177.1_Sox7_2/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GTCAGTGTGTGARGVD---
GTGCTAATTGTGTGTGTACGCT
 A C G T A C G T A C G T A C T G C G A T T G A C G C T A A T C G A C G T T A C G A C G T C T A G C A G T T A C G C G T A T C A G T C A G T A C G C T A G A C G T A C G T A C G T
A C T G C G A T T A C G A T G C C G A T G T C A C G T A G C A T G C A T T C A G G C A T T A C G G A C T T A C G G C A T T C A G A C G T C T G A G A T C A C T G T A G C A G C T