Information for 2-AYCCAGKAAGCACATA (Motif 2)

C G T A A G T C T G A C A G T C C G T A A T C G A C G T C G T A C G T A T A C G A G T C T G C A A T G C C G T A A C G T G T C A
Reverse Opposite:
A C G T G T C A C G A T A T C G A C G T T C A G A T G C G A C T A C G T T G C A A T G C G A C T C T A G A C T G T C A G C G A T
p-value:1e-10
log p-value:-2.328e+01
Information Content per bp:1.677
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif5.81%
Number of Background Sequences with motif14.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets50.2 +/- 21.7bp
Average Position of motif in Background48.2 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:1
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AYCCAGKAAGCACATA
--ACAGGAAGTG----
 C G T A A G T C T G A C A G T C C G T A A T C G A C G T C G T A C G T A T A C G A G T C T G C A A T G C C G T A A C G T G T C A
A C G T A C G T T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G A C G T A C G T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:2
Score:0.55
Offset:5
Orientation:forward strand
Alignment:AYCCAGKAAGCACATA-----
-----CGAAGCACACAAAATA
 C G T A A G T C T G A C A G T C C G T A A T C G A C G T C G T A C G T A T A C G A G T C T G C A A T G C C G T A A C G T G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:3
Score:0.55
Offset:7
Orientation:forward strand
Alignment:AYCCAGKAAGCACATA-
-------AAGCACTTAA
 C G T A A G T C T G A C A G T C C G T A A T C G A C G T C G T A C G T A T A C G A G T C T G C A A T G C C G T A A C G T G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A

PH0112.1_Nkx2-3/Jaspar

Match Rank:4
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:AYCCAGKAAGCACATA---
---CNTTAAGTACTTAANG
 C G T A A G T C T G A C A G T C C G T A A T C G A C G T C G T A C G T A T A C G A G T C T G C A A T G C C G T A A C G T G T C A A C G T A C G T A C G T
A C G T A C G T A C G T G A T C C G T A G A C T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T C G T A T C G A T C G A C T A G

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:AYCCAGKAAGCACATA
-ANCAGGATGT-----
 C G T A A G T C T G A C A G T C C G T A A T C G A C G T C G T A C G T A T A C G A G T C T G C A A T G C C G T A A C G T G T C A
A C G T C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T A C G T A C G T A C G T A C G T A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AYCCAGKAAGCACATA
-AACAGGAAGT-----
 C G T A A G T C T G A C A G T C C G T A A T C G A C G T C G T A C G T A T A C G A G T C T G C A A T G C C G T A A C G T G T C A
A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T A C G T A C G T A C G T A C G T

ZNF143/MA0088.2/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AYCCAGKAAGCACATA
TACCCACAATGCATTG-
 A C G T C G T A A G T C T G A C A G T C C G T A A T C G A C G T C G T A C G T A T A C G A G T C T G C A A T G C C G T A A C G T G T C A
A G C T C G T A G T A C G T A C A G T C C T G A A G T C T C G A C T G A C G A T T C A G A G T C G T C A G A C T G A C T C T A G A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:8
Score:0.53
Offset:6
Orientation:forward strand
Alignment:AYCCAGKAAGCACATA
------AAACCACANN
 C G T A A G T C T G A C A G T C C G T A A T C G A C G T C G T A C G T A T A C G A G T C T G C A A T G C C G T A A C G T G T C A
A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer

Match Rank:9
Score:0.52
Offset:1
Orientation:forward strand
Alignment:AYCCAGKAAGCACATA
-AACCGGAAGT-----
 C G T A A G T C T G A C A G T C C G T A A T C G A C G T C G T A C G T A T A C G A G T C T G C A A T G C C G T A A C G T G T C A
A C G T T C G A C T G A T A G C T G A C T C A G T C A G C G T A C G T A T C A G A G C T A C G T A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.52
Offset:5
Orientation:forward strand
Alignment:AYCCAGKAAGCACATA
-----CCAGGAACAG-
 C G T A A G T C T G A C A G T C C G T A A T C G A C G T C G T A C G T A T A C G A G T C T G C A A T G C C G T A A C G T G T C A
A C G T A C G T A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T