Information for 6-GAACGGGGTGAAA (Motif 11)

A C T G C G T A C G T A A G T C A C T G A C T G A C T G A C T G A C G T A C T G C G T A C T G A C G T A
Reverse Opposite:
A C G T A G C T A C G T A G T C C G T A A G T C A G T C A G T C A G T C T A C G A C G T A C G T A G T C
p-value:1e-5
log p-value:-1.332e+01
Information Content per bp:1.928
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif2.33%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.7 +/- 22.4bp
Average Position of motif in Background27.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0013.1_Eomes_1/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GAACGGGGTGAAA---
GAAAAGGTGTGAAAATT
 A C G T A C T G C G T A C G T A A G T C A C T G A C T G A C T G A C T G A C G T A C T G C G T A C T G A C G T A A C G T A C G T A C G T
A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:GAACGGGGTGAAA
--ATGGGGTGAT-
 A C T G C G T A C G T A A G T C A C T G A C T G A C T G A C T G A C G T A C T G C G T A C T G A C G T A
A C G T A C G T T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T A C G T

SREBF2/MA0596.1/Jaspar

Match Rank:3
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GAACGGGGTGAAA
--ATGGGGTGAT-
 A C T G C G T A C G T A A G T C A C T G A C T G A C T G A C T G A C G T A C T G C G T A C T G A C G T A
A C G T A C G T T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T A C G T

SREBF1/MA0595.1/Jaspar

Match Rank:4
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GAACGGGGTGAAA
--GTGGGGTGAT-
 A C T G C G T A C G T A A G T C A C T G A C T G A C T G A C T G A C G T A C T G C G T A C T G A C G T A
A C G T A C G T T C A G A C G T A T C G C T A G A T C G A T C G A C G T A C T G C G T A A G C T A C G T

EOMES/MA0800.1/Jaspar

Match Rank:5
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GAACGGGGTGAAA--
--AAGGTGTGAAAAT
 A C T G C G T A C G T A A G T C A C T G A C T G A C T G A C T G A C G T A C T G C G T A C T G A C G T A A C G T A C G T
A C G T A C G T C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T

TBX21/MA0690.1/Jaspar

Match Rank:6
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GAACGGGGTGAAA
--AAGGTGTGAA-
 A C T G C G T A C G T A A G T C A C T G A C T G A C T G A C T G A C G T A C T G C G T A C T G A C G T A
A C G T A C G T C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A A C G T

TBX2/MA0688.1/Jaspar

Match Rank:7
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GAACGGGGTGAAA
--AAGGTGTGAAA
 A C T G C G T A C G T A A G T C A C T G A C T G A C T G A C T G A C G T A C T G C G T A C T G A C G T A
A C G T A C G T C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A

PB0157.1_Rara_2/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GAACGGGGTGAAA--
AGAGCGGGGTCAAGTA
 A C G T A C T G C G T A C G T A A G T C A C T G A C T G A C T G A C T G A C G T A C T G C G T A C T G A C G T A A C G T A C G T
G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A

TBR1/MA0802.1/Jaspar

Match Rank:9
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GAACGGGGTGAAA
---AGGTGTGAAA
 A C T G C G T A C G T A A G T C A C T G A C T G A C T G A C T G A C G T A C T G C G T A C T G A C G T A
A C G T A C G T A C G T C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A

PB0137.1_Irf3_2/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GAACGGGGTGAAA
GGAGAAAGGTGCGA--
 A C G T A C G T A C G T A C T G C G T A C G T A A G T C A C T G A C T G A C T G A C T G A C G T A C T G C G T A C T G A C G T A
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A A C G T A C G T