Information for 12-AATGAACCAATTA (Motif 21)

C G T A C G T A C G A T A C T G C G T A C G T A G T A C A T G C C G T A C G T A A C G T A C G T C G T A
Reverse Opposite:
A C G T C G T A C G T A A C G T A C G T A T C G A C T G A C G T A C G T A G T C C G T A A C G T A C G T
p-value:1e-8
log p-value:-1.915e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.45%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.5 +/- 33.2bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0005.1_Barhl1/Jaspar

Match Rank:1
Score:0.78
Offset:1
Orientation:forward strand
Alignment:AATGAACCAATTA----
-AACAACCAATTAATTC
 C G T A C G T A C G A T A C T G C G T A C G T A G T A C A T G C C G T A C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C G T
A C G T G T C A C T G A G T A C T C G A C T G A A T G C G A T C C T G A G C T A A C G T G A C T C G T A C T G A A C G T C G A T G A T C

PH0006.1_Barhl2/Jaspar

Match Rank:2
Score:0.76
Offset:1
Orientation:forward strand
Alignment:AATGAACCAATTA----
-AAAAACCAATTAAGAA
 C G T A C G T A C G A T A C T G C G T A C G T A G T A C A T G C C G T A C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C G T
A C G T G T C A G T C A G T C A C T G A T C G A G A T C A G T C C T G A G C T A A C G T A C G T C G T A C T G A A T C G G C T A G C T A

PH0108.1_Msx3/Jaspar

Match Rank:3
Score:0.73
Offset:1
Orientation:forward strand
Alignment:AATGAACCAATTA----
-CAAAACCAATTAATTT
 C G T A C G T A C G A T A C T G C G T A C G T A G T A C A T G C C G T A C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C G T
A C G T T G A C T C G A G T C A C T G A T C G A A T G C A G T C C T G A G T C A C G A T G A C T C G T A C T G A A C G T G A C T G C A T

Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:4
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--AATGAACCAATTA-----
NTAATTDGCYAATTANNWWD
 A C G T A C G T C G T A C G T A C G A T A C T G C G T A C G T A G T A C A T G C C G T A C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
G A C T G A C T T C G A C G T A C G A T A G C T C T G A A C T G T G A C G A C T T C G A C G T A A C G T A G C T C T G A C T G A G T C A G C T A G C T A C G T A

Nobox/MA0125.1/Jaspar

Match Rank:5
Score:0.71
Offset:5
Orientation:reverse strand
Alignment:AATGAACCAATTA
-----ACCAATTA
 C G T A C G T A C G A T A C T G C G T A C G T A G T A C A T G C C G T A C G T A A C G T A C G T C G T A
A C G T A C G T A C G T A C G T A C G T T C G A A T G C G A T C G T C A G T C A A C G T C G A T C T G A

MSX2/MA0708.1/Jaspar

Match Rank:6
Score:0.70
Offset:6
Orientation:forward strand
Alignment:AATGAACCAATTA-
------CCAATTAA
 C G T A C G T A C G A T A C T G C G T A C G T A G T A C A T G C C G T A C G T A A C G T A C G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C G A T C G T C A G T C A A C G T A G C T G T C A T C G A

PH0028.1_En1/Jaspar

Match Rank:7
Score:0.69
Offset:1
Orientation:forward strand
Alignment:AATGAACCAATTA----
-GCGAACTAATTAATGC
 C G T A C G T A C G A T A C T G C G T A C G T A G T A C A T G C C G T A C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C G T
A C G T T C A G T A G C T A C G T G C A T G C A A G T C A G C T C T G A C T G A C G A T A C G T C T G A C T G A A C G T C T A G T A G C

PH0110.1_Nkx1-2/Jaspar

Match Rank:8
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:AATGAACCAATTA------
--TGNACTAATTAGTGNAN
 C G T A C G T A C G A T A C T G C G T A C G T A G T A C A T G C C G T A C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T T A C G G A T C T G C A G A T C G A C T G T C A C G T A C G A T A C G T C T G A C T A G A G C T A C T G T G A C G T C A G T A C

GBX2/MA0890.1/Jaspar

Match Rank:9
Score:0.69
Offset:5
Orientation:forward strand
Alignment:AATGAACCAATTA--
-----ACCAATTAGC
 C G T A C G T A C G A T A C T G C G T A C G T A G T A C A T G C C G T A C G T A A C G T A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A T G C G A T C T C G A T G C A A C G T A C G T G C T A T C A G A T G C

PH0081.1_Pdx1/Jaspar

Match Rank:10
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:AATGAACCAATTA----
-NTGNGCTAATTACCNN
 C G T A C G T A C G A T A C T G C G T A C G T A G T A C A T G C C G T A C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C G T
A C G T G T C A G A C T A T C G C G T A C T A G A T G C G A C T T G C A G C T A C A G T A C G T C T G A T A G C G A T C A C G T A C G T