Information for 9-TCHTCMCTCT (Motif 16)

A G C T A G T C G A C T C A G T T G A C G T A C A G T C C G A T A G T C C A G T
Reverse Opposite:
G T C A C T A G G C T A A C T G C A T G A C T G G T C A C T G A T C A G T C G A
p-value:1e-9
log p-value:-2.125e+01
Information Content per bp:1.575
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif4.53%
Number of Background Sequences with motif689.4
Percentage of Background Sequences with motif1.45%
Average Position of motif in Targets45.5 +/- 26.1bp
Average Position of motif in Background48.8 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F6/MA0471.1/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TCHTCMCTCT-
NCTTCCCGCCC
 A G C T A G T C G A C T C A G T T G A C G T A C A G T C C G A T A G T C C A G T A C G T
A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TCHTCMCTCT
NYTTCCCGCC
 A G C T A G T C G A C T C A G T T G A C G T A C A G T C C G A T A G T C C A G T
T A G C A G C T G A C T A G C T A T G C T G A C T A G C C A T G A T G C A T G C

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TCHTCMCTCT-
-CTGACCTTTG
 A G C T A G T C G A C T C A G T T G A C G T A C A G T C C G A T A G T C C A G T A C G T
A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

THAP1/MA0597.1/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TCHTCMCTCT
-CTGCCCGCA
 A G C T A G T C G A C T C A G T T G A C G T A C A G T C C G A T A G T C C A G T
A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:5
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TCHTCMCTCT
GCTCCGCCCMCY
 A C G T A C G T A G C T A G T C G A C T C A G T T G A C G T A C A G T C C G A T A G T C C A G T
C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

Gata4/MA0482.1/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TCHTCMCTCT-
TCTTATCTCCC
 A G C T A G T C G A C T C A G T T G A C G T A C A G T C C G A T A G T C C A G T A C G T
A G C T A T G C A G C T A C G T G T C A A C G T A G T C C G A T A T G C G A T C A G T C

E2F4/MA0470.1/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TCHTCMCTCT-
NNTTCCCGCCC
 A G C T A G T C G A C T C A G T T G A C G T A C A G T C C G A T A G T C C A G T A C G T
A G T C A G T C A G C T A G C T A T G C A T G C A G T C A C T G A T G C A T G C T G A C

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TCHTCMCTCT--
YCCGCCCACGCN
 A G C T A G T C G A C T C A G T T G A C G T A C A G T C C G A T A G T C C A G T A C G T A C G T
G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A

Gata1/MA0035.3/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TCHTCMCTCT
TTCTTATCTGT
 A C G T A G C T A G T C G A C T C A G T T G A C G T A C A G T C C G A T A G T C C A G T
A G C T A G C T A G T C A G C T A C G T C G T A A C G T A G T C C G A T A T C G G A C T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:10
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TCHTCMCTCT
--TGACCTYA
 A G C T A G T C G A C T C A G T T G A C G T A C A G T C C G A T A G T C C A G T
A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A