Information for 4-GAAGAACATAATACAG (Motif 8)

A T C G C T G A C G T A A C T G C G T A C G T A A T G C C G T A A C G T C G T A C G T A A C G T C G T A A G T C C T G A A C T G
Reverse Opposite:
A G T C A G C T A C T G A C G T C G T A A C G T A C G T C G T A C G A T A T C G C G A T A C G T A G T C A C G T A G C T A T G C
p-value:1e-7
log p-value:-1.667e+01
Information Content per bp:1.919
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif2.88%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.8 +/- 24.2bp
Average Position of motif in Background79.1 +/- 16.5bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0176.1_Sox5_2/Jaspar

Match Rank:1
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GAAGAACATAATACAG--
---TATCATAATTAAGGA
 A T C G C T G A C G T A A C T G C G T A C G T A A T G C C G T A A C G T C G T A C G T A A C G T C G T A A G T C C T G A A C T G A C G T A C G T
A C G T A C G T A C G T C G A T G C T A C G A T A G T C C T G A C A G T T G C A G C T A G C A T G A C T C G T A T G C A T A C G C A T G C G T A

PB0174.1_Sox30_2/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GAAGAACATAATACAG
TAAGATTATAATACGG
 A T C G C T G A C G T A A C T G C G T A C G T A A T G C C G T A A C G T C G T A C G T A A C G T C G T A A G T C C T G A A C T G
G A C T G T C A C G T A A C T G G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G C A T A G C T A C G T A C G

PB0208.1_Zscan4_2/Jaspar

Match Rank:3
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GAAGAACATAATACAG
CGAAGCACACAAAATA-
 A C G T A T C G C T G A C G T A A C T G C G T A C G T A A T G C C G T A A C G T C G T A C G T A A C G T C G T A A G T C C T G A A C T G
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A A C G T

ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GAAGAACATAATACAG--
AADGAGVCANYASTACAGNC
 A C G T A C G T A T C G C T G A C G T A A C T G C G T A C G T A A T G C C G T A A C G T C G T A C G T A A C G T C G T A A G T C C T G A A C T G A C G T A C G T
G C T A T C G A C G A T C T A G C T G A C A T G T A G C G T A C C T G A C A T G G A T C G C T A T A G C G A C T C T G A A T G C T G C A C T A G C T G A G A T C

PB0121.1_Foxj3_2/Jaspar

Match Rank:5
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GAAGAACATAATACAG--
-AACACCAAAACAAAGGA
 A T C G C T G A C G T A A C T G C G T A C G T A A T G C C G T A A C G T C G T A C G T A A C G T C G T A A G T C C T G A A C T G A C G T A C G T
A C G T G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

PB0079.1_Sry_1/Jaspar

Match Rank:6
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GAAGAACATAATACAG
NANTATTATAATTNNN
 A T C G C T G A C G T A A C T G C G T A C G T A A T G C C G T A A C G T C G T A C G T A A C G T C G T A A G T C C T G A A C T G
A C T G G C T A G C T A G A C T C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T G T C A C G A T T G C A

PB0185.1_Tcf1_2/Jaspar

Match Rank:7
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:GAAGAACATAATACAG----
------NNTAATCCNGNCNN
 A T C G C T G A C G T A A C T G C G T A C G T A A T G C C G T A A C G T C G T A C G T A A C G T C G T A A G T C C T G A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A T C G T A C G C A T T G C A G T C A G A C T G T A C A G T C T C A G A T C G C T A G A G T C T G C A C G T A

PB0187.1_Tcf7_2/Jaspar

Match Rank:8
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GAAGAACATAATACAG
-NNNTTTNTAATACNG
 A T C G C T G A C G T A A C T G C G T A C G T A A T G C C G T A A C G T C G T A C G T A A C G T C G T A A G T C C T G A A C T G
A C G T C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G

PH0117.1_Nkx3-1/Jaspar

Match Rank:9
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---GAAGAACATAATACAG
TACTAAGTACTTAAATG--
 A C G T A C G T A C G T A T C G C T G A C G T A A C T G C G T A C G T A A T G C C G T A A C G T C G T A C G T A A C G T C G T A A G T C C T G A A C T G
C G A T C G A T G A T C C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T G A C G T A C G A T A T C G A C G T A C G T

PH0112.1_Nkx2-3/Jaspar

Match Rank:10
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---GAAGAACATAATACAG
CNTTAAGTACTTAANG---
 A C G T A C G T A C G T A T C G C T G A C G T A A C T G C G T A C G T A A T G C C G T A A C G T C G T A C G T A A C G T C G T A A G T C C T G A A C T G
G A T C C G T A G A C T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T C G T A T C G A T C G A C T A G A C G T A C G T A C G T