Information for 3-TTTTTYTHCTTCC (Motif 5)

A G C T G A C T A C G T C G A T A G C T A G C T A G C T G T A C A G T C C G A T G C A T A G T C A G T C
Reverse Opposite:
C T A G C T A G C G T A C G T A A C T G C A T G C T G A C T G A C T G A C G T A C G T A C T G A C T G A
p-value:1e-7
log p-value:-1.805e+01
Information Content per bp:1.728
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif10.58%
Number of Background Sequences with motif458.3
Percentage of Background Sequences with motif1.04%
Average Position of motif in Targets57.2 +/- 25.5bp
Average Position of motif in Background52.2 +/- 26.1bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0182.1_Srf_2/Jaspar

Match Rank:1
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----TTTTTYTHCTTCC
NNNNTTTTTTTTTNAAC-
 A C G T A C G T A C G T A C G T A C G T A G C T G A C T A C G T C G A T A G C T A G C T A G C T G T A C A G T C C G A T G C A T A G T C A G T C
C G A T C G T A T C G A A C G T C A G T C A G T C A G T C G A T A C G T A C G T A C G T G A C T G A C T G C A T G C T A T G C A A T G C A C G T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TTTTTYTHCTTCC-
TTTTTTTTCNNGTN
 A G C T G A C T A C G T C G A T A G C T A G C T A G C T G T A C A G T C C G A T G C A T A G T C A G T C A C G T
G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A

PB0015.1_Foxa2_1/Jaspar

Match Rank:3
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TTTTTYTHCTTCC-
NNNTTTGTTTACTTTTN
 A C G T A C G T A C G T A G C T G A C T A C G T C G A T A G C T A G C T A G C T G T A C A G T C C G A T G C A T A G T C A G T C A C G T
T A C G G A C T A T G C C G A T C G A T C G A T C T A G C G A T C A G T C A G T C T G A A G T C G C A T G C A T C G A T C G A T C G A T

FOXP1/MA0481.1/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TTTTTYTHCTTCC-
CTTTGTTTACTTTTN
 A C G T A G C T G A C T A C G T C G A T A G C T A G C T A G C T G T A C A G T C C G A T G C A T A G T C A G T C A C G T
A G T C G C A T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G A C T A G C T G C A T C G A T C A T G

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TTTTTYTHCTTCC-
--GTTTCACTTCCG
 A G C T G A C T A C G T C G A T A G C T A G C T A G C T G T A C A G T C C G A T G C A T A G T C A G T C A C G T
A C G T A C G T A T C G G A C T A C G T A G C T A G T C G C T A A G T C G C A T A C G T A G T C G A T C A C T G

Foxj3/MA0851.1/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TTTTTYTHCTTCC-
NNNTTTGTTTACNTTNN
 A C G T A C G T A C G T A G C T G A C T A C G T C G A T A G C T A G C T A G C T G T A C A G T C C G A T G C A T A G T C A G T C A C G T
C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T

PB0017.1_Foxj3_1/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TTTTTYTHCTTCC-
NNNTTTGTTTACNTTNN
 A C G T A C G T A C G T A G C T G A C T A C G T C G A T A G C T A G C T A G C T G T A C A G T C C G A T G C A T A G T C A G T C A C G T
C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T

FOXP2/MA0593.1/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TTTTTYTHCTTCC
TNTGTTTACTT--
 A G C T G A C T A C G T C G A T A G C T A G C T A G C T G T A C A G T C C G A T G C A T A G T C A G T C
G A C T A G C T A C G T C T A G A C G T A C G T A C G T C G T A A G T C G C A T G A C T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:9
Score:0.57
Offset:7
Orientation:forward strand
Alignment:TTTTTYTHCTTCC
-------GCTTCC
 A G C T G A C T A C G T C G A T A G C T A G C T A G C T G T A C A G T C C G A T G C A T A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TTTTTYTHCTTCC
-ASTTTCACTTCC
 A G C T G A C T A C G T C G A T A G C T A G C T A G C T G T A C A G T C C G A T G C A T A G T C A G T C
A C G T C T G A A T G C G C A T G A C T G A C T A G T C G C T A A T G C G C A T C G A T A G T C G A T C