Information for 2-CGGCGACCKCACT (Motif 4)

G T A C T C A G A C T G G T A C T A C G C T G A A G T C A G T C A C G T A G T C C T G A A G T C C G A T
Reverse Opposite:
C G T A A C T G A G C T A C T G T G C A A C T G A C T G A G C T A T G C A C T G A G T C A G T C A C T G
p-value:1e-8
log p-value:-1.851e+01
Information Content per bp:1.764
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif4.81%
Number of Background Sequences with motif28.6
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets55.1 +/- 27.5bp
Average Position of motif in Background49.8 +/- 21.6bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLI2/MA0734.1/Jaspar

Match Rank:1
Score:0.73
Offset:2
Orientation:forward strand
Alignment:CGGCGACCKCACT-
--GCGACCACACTG
 G T A C T C A G A C T G G T A C T A C G C T G A A G T C A G T C A C G T A G T C C T G A A G T C C G A T A C G T
A C G T A C G T C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CGGCGACCKCACT
---CRCCCACGCA
 G T A C T C A G A C T G G T A C T A C G C T G A A G T C A G T C A C G T A G T C C T G A A G T C C G A T
A C G T A C G T A C G T G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A

RUNX3/MA0684.1/Jaspar

Match Rank:3
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CGGCGACCKCACT
---AAACCGCAAA
 G T A C T C A G A C T G G T A C T A C G C T G A A G T C A G T C A C G T A G T C C T G A A G T C C G A T
A C G T A C G T A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

HINFP/MA0131.2/Jaspar

Match Rank:4
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CGGCGACCKCACT
CAACGTCCGCGG-
 G T A C T C A G A C T G G T A C T A C G C T G A A G T C A G T C A C G T A G T C C T G A A G T C C G A T
A T G C T G C A T C G A A T G C A T C G A C G T A T G C A G T C A T C G A T G C C A T G A C T G A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CGGCGACCKCACT
--GAGSCCGAGC-
 G T A C T C A G A C T G G T A C T A C G C T G A A G T C A G T C A C G T A G T C C T G A A G T C C G A T
A C G T A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:6
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CGGCGACCKCACT
---AAACCGCAA-
 G T A C T C A G A C T G G T A C T A C G C T G A A G T C A G T C A C G T A G T C C T G A A G T C C G A T
A C G T A C G T A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T

PB0157.1_Rara_2/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CGGCGACCKCACT--
NNCNTGACCCCGCTCT
 A C G T G T A C T C A G A C T G G T A C T A C G C T G A A G T C A G T C A C G T A G T C C T G A A G T C C G A T A C G T A C G T
A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T

ZBTB7A/MA0750.1/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CGGCGACCKCACT
-GGCGACCACCGA
 G T A C T C A G A C T G G T A C T A C G C T G A A G T C A G T C A C G T A G T C C T G A A G T C C G A T
A C G T A C T G T C A G A T G C C T A G G T C A A G T C A T G C G T C A A G T C G T A C C A T G T G C A

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:9
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CGGCGACCKCACT-----
---NRGCCCCRCCCHBNN
 G T A C T C A G A C T G G T A C T A C G C T G A A G T C A G T C A C G T A G T C C T G A A G T C C G A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T T C A G C T A G A G T C A G T C G T A C A G T C C T G A A G T C A G T C A G T C G A C T A G T C A C T G A T G C

PB0025.1_Glis2_1/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CGGCGACCKCACT---
TATCGACCCCCCACAG
 G T A C T C A G A C T G G T A C T A C G C T G A A G T C A G T C A C G T A G T C C T G A A G T C C G A T A C G T A C G T A C G T
G A C T G C T A G C A T T A G C A C T G T G C A A G T C A G T C G A T C G A T C G A T C G A T C T G C A A G T C C T G A C A T G