Information for 5-TMSAAYCACMWAA (Motif 9)

A C G T G T C A A T G C C G T A C G T A A G C T A G T C C G T A A G T C G T C A G C A T C T G A C G T A
Reverse Opposite:
A C G T A G C T C G A T A C G T A C T G A C G T A C T G C T A G A C G T A C G T A T C G A C G T C G T A
p-value:1e-5
log p-value:-1.289e+01
Information Content per bp:1.840
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif3.75%
Number of Background Sequences with motif14.3
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets48.8 +/- 24.1bp
Average Position of motif in Background60.2 +/- 33.6bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.67
Offset:2
Orientation:forward strand
Alignment:TMSAAYCACMWAA
--AAACCACANN-
 A C G T G T C A A T G C C G T A C G T A A G C T A G T C C G T A A G T C G T C A G C A T C T G A C G T A
A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TMSAAYCACMWAA
-NWAACCACADNN
 A C G T G T C A A T G C C G T A C G T A A G C T A G T C C G T A A G T C G T C A G C A T C T G A C G T A
A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

PB0208.1_Zscan4_2/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TMSAAYCACMWAA----
-CGAAGCACACAAAATA
 A C G T G T C A A T G C C G T A C G T A A G C T A G T C C G T A A G T C G T C A G C A T C T G A C G T A A C G T A C G T A C G T A C G T
A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TMSAAYCACMWAA
--AAACCACAGAN
 A C G T G T C A A T G C C G T A C G T A A G C T A G T C C G T A A G T C G T C A G C A T C T G A C G T A
A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TMSAAYCACMWAA
-NAAACCACAG--
 A C G T G T C A A T G C C G T A C G T A A G C T A G T C C G T A A G T C G T C A G C A T C T G A C G T A
A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:6
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TMSAAYCACMWAA
--AAACCGCAAA-
 A C G T G T C A A T G C C G T A C G T A A G C T A G T C C G T A A G T C G T C A G C A T C T G A C G T A
A C G T A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TMSAAYCACMWAA
--AAACCACAGC-
 A C G T G T C A A T G C C G T A C G T A A G C T A G T C C G T A A G T C G T C A G C A T C T G A C G T A
A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T

ZBTB7B/MA0694.1/Jaspar

Match Rank:8
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TMSAAYCACMWAA
-GCGACCACCGAA
 A C G T G T C A A T G C C G T A C G T A A G C T A G T C C G T A A G T C G T C A G C A T C T G A C G T A
A C G T C T A G T A G C C T A G G T C A T G A C A T G C G T C A G T A C A G T C T C A G G C T A G T C A

ZBTB7C/MA0695.1/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TMSAAYCACMWAA
-GCGACCACCGAA
 A C G T G T C A A T G C C G T A C G T A A G C T A G T C C G T A A G T C G T C A G C A T C T G A C G T A
A C G T C T A G T A G C C T A G G T C A G T A C A G T C G T C A G T A C G A T C T C A G G T C A T G C A

Gfi1/MA0038.1/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TMSAAYCACMWAA
-CAAATCACTG--
 A C G T G T C A A T G C C G T A C G T A A G C T A G T C C G T A A G T C G T C A G C A T C T G A C G T A
A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G A C G T A C G T