Information for 4-CACWGWCACTNTCCAC (Motif 5)

A T G C C G T A G T A C C G T A A C T G C G T A T A G C C G T A G T A C A G C T C T A G G C A T A T G C A G T C G T C A A G T C
Reverse Opposite:
C T A G A C G T C T A G A T C G C G T A A G T C C T G A A C T G A C G T A C T G C G A T T A G C C G A T A C T G A C G T A T C G
p-value:1e-7
log p-value:-1.703e+01
Information Content per bp:1.685
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif6.25%
Number of Background Sequences with motif50.6
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets39.0 +/- 24.5bp
Average Position of motif in Background47.2 +/- 38.8bp
Strand Bias (log2 ratio + to - strand density)3.0
Multiplicity (# of sites on avg that occur together)1.80
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1/MA0508.1/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CACWGWCACTNTCCAC
TCACTTTCACTTTCN--
 A C G T A T G C C G T A G T A C C G T A A C T G C G T A T A G C C G T A G T A C A G C T C T A G G C A T A T G C A G T C G T C A A G T C
G A C T G A T C T G C A A G T C G C A T G A C T A C G T A G T C G T C A G A T C A G C T A G C T G A C T G A T C G C A T A C G T A C G T

PB0177.1_Sox7_2/Jaspar

Match Rank:2
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------CACWGWCACTNTCCAC
NNCNNNCNCANACAATTAGNAC
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G T A G T A C C G T A A C T G C G T A T A G C C G T A G T A C A G C T C T A G G C A T A T G C A G T C G T C A A G T C
T C G A A T C G T G A C C A T G A G C T G T C A A G T C C G T A A T G C C T G A A T G C C G T A A G T C C G T A C G T A G C A T C A G T G C T A T A C G A T G C G C T A T G A C

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CACWGWCACTNTCCAC
-ACTTTCACTTTC---
 A T G C C G T A G T A C C G T A A C T G C G T A T A G C C G T A G T A C A G C T C T A G G C A T A T G C A G T C G T C A A G T C
A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C A C G T A C G T A C G T

NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:4
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CACWGWCACTNTCCAC--
NTGACTCANTTTTTCCANTN
 A C G T A C G T A T G C C G T A G T A C C G T A A C T G C G T A T A G C C G T A G T A C A G C T C T A G G C A T A T G C A G T C G T C A A G T C A C G T A C G T
T C G A G C A T A C T G C G T A A T G C G C A T G T A C C G T A A G C T G C A T A G C T A G C T G A C T A G C T A G T C A G T C G C T A A G C T G A C T A T G C

ZNF354C/MA0130.1/Jaspar

Match Rank:5
Score:0.53
Offset:10
Orientation:forward strand
Alignment:CACWGWCACTNTCCAC
----------ATCCAC
 A T G C C G T A G T A C C G T A A C T G C G T A T A G C C G T A G T A C A G C T C T A G G C A T A T G C A G T C G T C A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:6
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CACWGWCACTNTCCAC
-ACTTTCACTTTC---
 A T G C C G T A G T A C C G T A A C T G C G T A T A G C C G T A G T A C A G C T C T A G G C A T A T G C A G T C G T C A A G T C
A C G T C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C A C G T A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:7
Score:0.52
Offset:7
Orientation:forward strand
Alignment:CACWGWCACTNTCCAC-
-------ATTTTCCATT
 A T G C C G T A G T A C C G T A A C T G C G T A T A G C C G T A G T A C A G C T C T A G G C A T A T G C A G T C G T C A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:8
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----CACWGWCACTNTCCAC
CAATCACTGGCAGAAT----
 A C G T A C G T A C G T A C G T A T G C C G T A G T A C C G T A A C T G C G T A T A G C C G T A G T A C A G C T C T A G G C A T A T G C A G T C G T C A A G T C
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T A C G T A C G T A C G T A C G T

Nfe2l2/MA0150.2/Jaspar

Match Rank:9
Score:0.49
Offset:0
Orientation:forward strand
Alignment:CACWGWCACTNTCCAC
CAGCATGACTCAGCA-
 A T G C C G T A G T A C C G T A A C T G C G T A T A G C C G T A G T A C A G C T C T A G G C A T A T G C A G T C G T C A A G T C
G T A C C T G A T A C G T G A C T C G A A C G T A C T G C G T A A T G C G C A T G A T C C T G A T A C G A T G C C G T A A C G T

IRF1/MA0050.2/Jaspar

Match Rank:10
Score:0.48
Offset:-3
Orientation:forward strand
Alignment:---CACWGWCACTNTCCAC--
TTTTACTTTCACTTTCACTTT
 A C G T A C G T A C G T A T G C C G T A G T A C C G T A A C T G C G T A T A G C C G T A G T A C A G C T C T A G G C A T A T G C A G T C G T C A A G T C A C G T A C G T
G A C T A G C T A G C T A G C T C T G A A T G C C G A T A G C T A G C T A G T C C T G A A T G C G C A T G A C T G A C T A G T C C G T A A G T C G A C T G C A T G A C T