Information for 1-CATCGACACT (Motif 12)

A G T C C G T A A G C T G T A C A C T G C G T A A G T C C G T A A G T C A C G T
Reverse Opposite:
G T C A A C T G A C G T A C T G A C G T A G T C A C T G C T G A A C G T A C T G
p-value:1e-4
log p-value:-1.126e+01
Information Content per bp:1.931
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif5.00%
Number of Background Sequences with motif77.3
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets47.2 +/- 24.2bp
Average Position of motif in Background51.9 +/- 45.3bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0035.1_Irf5_1/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CATCGACACT--
ATAAACCGAAACCAA
 A C G T A C G T A C G T A G T C C G T A A G C T G T A C A C T G C G T A A G T C C G T A A G T C A C G T A C G T A C G T
C G T A C G A T C T G A C G T A C T G A G A T C G A T C C T A G C T G A C G T A C G T A T A G C G A T C C T G A T C G A

PB0036.1_Irf6_1/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CATCGACACT-----
CTGATCGAAACCAAAGT
 A C G T A C G T A G T C C G T A A G C T G T A C A C T G C G T A A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G T A C C G A T C A T G C T G A G A C T G A T C C T A G T C G A C G T A C G T A T A G C A G T C T C G A T G C A C G T A C A T G C G A T

PB0034.1_Irf4_1/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CATCGACACT---
CGTATCGAAACCAAA
 A C G T A C G T A G T C C G T A A G C T G T A C A C T G C G T A A G T C C G T A A G T C A C G T A C G T A C G T A C G T
T G A C C T A G C G A T C G T A G A C T A G T C C T A G T C G A C G T A C G T A T A G C G A T C C T G A G T C A C G T A

PB0037.1_Isgf3g_1/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CATCGACACT--
CAAAATCGAAACTAA
 A C G T A C G T A C G T A G T C C G T A A G C T G T A C A C T G C G T A A G T C C G T A A G T C A C G T A C G T A C G T
T G A C C T G A C T G A C G T A G C T A G C A T A G T C C T A G G T C A C G T A G C T A T A G C G A C T C G T A G C T A

PB0117.1_Eomes_2/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CATCGACACT-----
NNGGCGACACCTCNNN
 A C G T A G T C C G T A A G C T G T A C A C T G C G T A A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:6
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CATCGACACT---
---MRSCACTYAA
 A G T C C G T A A G C T G T A C A C T G C G T A A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A

PB0139.1_Irf5_2/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CATCGACACT---
TTGACCGAGAATTCC
 A C G T A C G T A G T C C G T A A G C T G T A C A C T G C G T A A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

MEIS1/MA0498.2/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CATCGACACT
--TTGACAG-
 A G T C C G T A A G C T G T A C A C T G C G T A A G T C C G T A A G T C A C G T
A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CATCGACACT
TCCAATCCACA--
 A C G T A C G T A C G T A G T C C G T A A G C T G T A C A C T G C G T A A G T C C G T A A G T C A C G T
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:10
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CATCGACACT---
----GACAATGNN
 A G T C C G T A A G C T G T A C A C T G C G T A A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G