Information for 3-GGAKGCAAAAGAGAAA (Motif 6)

C A T G C T A G C G T A C A G T A C T G G T A C G T C A C G T A C G T A G C T A C T A G C G T A C T A G G T C A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T A G T C C G A T A G T C C G A T A C G T A C G T A C G T A C T G T A G C G T C A C G A T A G T C G A T C
p-value:1e-8
log p-value:-1.877e+01
Information Content per bp:1.743
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif2.27%
Number of Background Sequences with motif38.6
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets46.7 +/- 31.3bp
Average Position of motif in Background51.2 +/- 24.6bp
Strand Bias (log2 ratio + to - strand density)-2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF1/MA0050.2/Jaspar

Match Rank:1
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:GGAKGCAAAAGAGAAA------
-AAANNGAAAGTGAAAGTAAAN
 C A T G C T A G C G T A C A G T A C T G G T A C G T C A C G T A C G T A G C T A C T A G C G T A C T A G G T C A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:2
Score:0.71
Offset:6
Orientation:forward strand
Alignment:GGAKGCAAAAGAGAAA--
------GAAAGTGAAAGT
 C A T G C T A G C G T A C A G T A C T G G T A C G T C A C G T A C G T A G C T A C T A G C G T A C T A G G T C A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T

PRDM1/MA0508.1/Jaspar

Match Rank:3
Score:0.69
Offset:5
Orientation:forward strand
Alignment:GGAKGCAAAAGAGAAA----
-----AGAAAGTGAAAGTGA
 C A T G C T A G C G T A C A G T A C T G G T A C G T C A C G T A C G T A G C T A C T A G C G T A C T A G G T C A C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.69
Offset:6
Orientation:reverse strand
Alignment:GGAKGCAAAAGAGAAA--
------GAAAGTGAAAGT
 C A T G C T A G C G T A C A G T A C T G G T A C G T C A C G T A C G T A G C T A C T A G C G T A C T A G G T C A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T

IRF7/MA0772.1/Jaspar

Match Rank:5
Score:0.68
Offset:4
Orientation:forward strand
Alignment:GGAKGCAAAAGAGAAA--
----ACGAAAGCGAAAGT
 C A T G C T A G C G T A C A G T A C T G G T A C G T C A C G T A C G T A G C T A C T A G C G T A C T A G G T C A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T G T C A T G A C A C T G T G C A C G T A G T C A T C A G G A T C C T A G G T C A T C G A G C T A T C A G G C A T

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:6
Score:0.68
Offset:6
Orientation:forward strand
Alignment:GGAKGCAAAAGAGAAA--
------GAAASYGAAASY
 C A T G C T A G C G T A C A G T A C T G G T A C G T C A C G T A C G T A G C T A C T A G C G T A C T A G G T C A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C G A C T G A C G T A T A C G G A C T T C A G T C G A G T C A T G C A T A C G A G C T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:7
Score:0.67
Offset:6
Orientation:reverse strand
Alignment:GGAKGCAAAAGAGAAA--
------GAAACTGAAACT
 C A T G C T A G C G T A C A G T A C T G G T A C G T C A C G T A C G T A G C T A C T A G C G T A C T A G G T C A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:8
Score:0.67
Offset:6
Orientation:reverse strand
Alignment:GGAKGCAAAAGAGAAA--
------GAAAMTGAAACT
 C A T G C T A G C G T A C A G T A C T G G T A C G T C A C G T A C G T A G C T A C T A G C G T A C T A G G T C A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T

IRF2/MA0051.1/Jaspar

Match Rank:9
Score:0.67
Offset:5
Orientation:forward strand
Alignment:GGAKGCAAAAGAGAAA-------
-----GGAAAGCGAAACCAAAAC
 C A T G C T A G C G T A C A G T A C T G G T A C G T C A C G T A C G T A G C T A C T A G C G T A C T A G G T C A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T C G C T A G C G T A C G T A C G T A C T A G A G C T A C T G C G T A C G T A C G T A A T C G A G T C C T G A C G T A C G T A G C T A G T A C

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:10
Score:0.64
Offset:6
Orientation:forward strand
Alignment:GGAKGCAAAAGAGAAA--
------GRAASTGAAAST
 C A T G C T A G C G T A C A G T A C T G G T A C G T C A C G T A C G T A G C T A C T A G C G T A C T A G G T C A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T