Information for 2-TTTGTAAGAG (Motif 5)

C G A T A C G T C A G T A C T G A G C T C G T A C T G A A T C G C G T A C T A G
Reverse Opposite:
G A T C G C A T A T G C A G C T A C G T T C G A A G T C G C T A C G T A C G T A
p-value:1e-9
log p-value:-2.198e+01
Information Content per bp:1.818
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif5.18%
Number of Background Sequences with motif311.7
Percentage of Background Sequences with motif0.64%
Average Position of motif in Targets56.6 +/- 25.1bp
Average Position of motif in Background48.4 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0187.1_Tcf7_2/Jaspar

Match Rank:1
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TTTGTAAGAG--
NNNTTTNTAATACNG
 A C G T A C G T A C G T C G A T A C G T C A G T A C T G A G C T C G T A C T G A A T C G C G T A C T A G A C G T A C G T
C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G

HOXC13/MA0907.1/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TTTGTAAGAG-
NTTTTACGAGN
 C G A T A C G T C A G T A C T G A G C T C G T A C T G A A T C G C G T A C T A G A C G T
C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TTTGTAAGAG--
--TGGAACAGMA
 C G A T A C G T C A G T A C T G A G C T C G T A C T G A A T C G C G T A C T A G A C G T A C G T
A C G T A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A

PH0048.1_Hoxa13/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TTTGTAAGAG----
ANATTTTACGAGNNNN
 A C G T A C G T C G A T A C G T C A G T A C T G A G C T C G T A C T G A A T C G C G T A C T A G A C G T A C G T A C G T A C G T
G C T A T C G A C G T A C G A T C A G T C G A T C G A T C T G A A G T C C T A G C T G A A T C G T A C G C G A T G C A T C G A T

PH0068.1_Hoxc13/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TTTGTAAGAG----
NAATTTTACGAGNTNN
 A C G T A C G T C G A T A C G T C A G T A C T G A G C T C G T A C T G A A T C G C G T A C T A G A C G T A C G T A C G T A C G T
G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T

SOX10/MA0442.1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TTTGTAAGAG
CTTTGT-----
 A C G T C G A T A C G T C A G T A C T G A G C T C G T A C T G A A T C G C G T A C T A G
A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TTTGTAAGAG
TTTGAAACCG
 C G A T A C G T C A G T A C T G A G C T C G T A C T G A A T C G C G T A C T A G
A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

NFIL3/MA0025.1/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TTTGTAAGAG
TTATGTAACAT
 A C G T C G A T A C G T C A G T A C T G A G C T C G T A C T G A A T C G C G T A C T A G
C G A T A C G T C G T A A G C T C T A G A C G T C G T A C T G A A G T C T C A G G A C T

NKX3-2/MA0122.2/Jaspar

Match Rank:9
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TTTGTAAGAG--
---TTAAGTGGN
 C G A T A C G T C A G T A C T G A G C T C G T A C T G A A T C G C G T A C T A G A C G T A C G T
A C G T A C G T A C G T G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T

PH0004.1_Nkx3-2/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TTTGTAAGAG------
NTNNTTAAGTGGTTANN
 A C G T C G A T A C G T C A G T A C T G A G C T C G T A C T G A A T C G C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C A G T A C G T A T C G G C A T C G A T C T G A C T G A A C T G C G A T C T A G A T C G C G A T A G C T C G T A C G A T A C T G