Information for 1-ACGTAGCCAGACC (Motif 1)

C G T A A G T C A C T G C G A T C T G A C T A G T A G C A G T C C G T A A C T G C G T A A G T C A G T C
Reverse Opposite:
A C T G T A C G A C G T A G T C A C G T A C T G A C T G A G T C A G C T C G T A A G T C C T A G A C G T
p-value:1e-11
log p-value:-2.667e+01
Information Content per bp:1.841
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.62%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.2 +/- 23.0bp
Average Position of motif in Background64.0 +/- 16.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:ACGTAGCCAGACC
---ATGCCAGACN
 C G T A A G T C A C T G C G A T C T G A C T A G T A G C A G T C C G T A A C T G C G T A A G T C A G T C
A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

PB0060.1_Smad3_1/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:forward strand
Alignment:ACGTAGCCAGACC-----
-CAAATCCAGACATCACA
 C G T A A G T C A C T G C G A T C T G A C T A G T A G C A G T C C G T A A C T G C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:ACGTAGCCAGACC---
------CCAGACRSVB
 C G T A A G T C A C T G C G A T C T G A C T A G T A G C A G T C C G T A A C T G C G T A A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:ACGTAGCCAGACC-
------CCAGACAG
 C G T A A G T C A C T G C G A T C T G A C T A G T A G C A G T C C G T A A C T G C G T A A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:5
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:ACGTAGCCAGACC
--GTAAACAG---
 C G T A A G T C A C T G C G A T C T G A C T A G T A G C A G T C C G T A A C T G C G T A A G T C A G T C
A C G T A C G T C T A G C A G T G T C A C G T A C T G A A G T C C G T A T A C G A C G T A C G T A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:6
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:ACGTAGCCAGACC---
----GGCCACACCCAN
 C G T A A G T C A C T G C G A T C T G A C T A G T A G C A G T C C G T A A C T G C G T A A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:7
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--ACGTAGCCAGACC
GCACGTACCC-----
 A C G T A C G T C G T A A G T C A C T G C G A T C T G A C T A G T A G C A G T C C G T A A C T G C G T A A G T C A G T C
C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C A C G T A C G T A C G T A C G T A C G T

FOXP2/MA0593.1/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:forward strand
Alignment:ACGTAGCCAGACC
AAGTAAACAAA--
 C G T A A G T C A C T G C G A T C T G A C T A G T A G C A G T C C G T A A C T G C G T A A G T C A G T C
C T G A C G T A C T A G C G A T C G T A C G T A C G T A A G T C C G T A T C G A C T G A A C G T A C G T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:9
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:ACGTAGCCAGACC-
--GWAAYHTGABMC
 C G T A A G T C A C T G C G A T C T G A C T A G T A G C A G T C C G T A A C T G C G T A A G T C A G T C A C G T
A C G T A C G T A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.53
Offset:5
Orientation:forward strand
Alignment:ACGTAGCCAGACC--
-----GCCACACCCA
 C G T A A G T C A C T G C G A T C T G A C T A G T A G C A G T C C G T A A C T G C G T A A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A