Information for 7-CCAAGGTTAACCT (Motif 9)

A T G C G A T C T C G A C G T A A C T G T A C G G A C T A G C T C T G A T C G A A G T C T A G C A C G T
Reverse Opposite:
T C G A A T C G T A C G A C G T A G C T T C G A C T G A A G T C G T A C C G A T A G C T C T A G A T C G
p-value:1e-10
log p-value:-2.488e+01
Information Content per bp:1.696
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif6.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.9 +/- 33.2bp
Average Position of motif in Background43.5 +/- 14.5bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CCAAGGTTAACCT
CAAAGGTCAG---
 A T G C G A T C T C G A C G T A A C T G T A C G G A C T A G C T C T G A T C G A A G T C T A G C A C G T
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CCAAGGTTAACCT
-CAAGGHCANV--
 A T G C G A T C T C G A C G T A A C T G T A C G G A C T A G C T C T G A T C G A A G T C T A G C A C G T
A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CCAAGGTTAACCT
BTCAAGGTCA----
 A C G T A T G C G A T C T C G A C G T A A C T G T A C G G A C T A G C T C T G A T C G A A G T C T A G C A C G T
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CCAAGGTTAACCT
TCAAGGTCAN---
 A T G C G A T C T C G A C G T A A C T G T A C G G A C T A G C T C T G A T C G A A G T C T A G C A C G T
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CCAAGGTTAACCT
NTCAAGGTCA----
 A C G T A T G C G A T C T C G A C G T A A C T G T A C G G A C T A G C T C T G A T C G A A G T C T A G C A C G T
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CCAAGGTTAACCT
TCAAGGTCAT---
 A T G C G A T C T C G A C G T A A C T G T A C G G A C T A G C T C T G A T C G A A G T C T A G C A C G T
G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CCAAGGTTAACCT
-TRAGGTCA----
 A T G C G A T C T C G A C G T A A C T G T A C G G A C T A G C T C T G A T C G A A G T C T A G C A C G T
A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:8
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CCAAGGTTAACCT
--AAGGTCAC---
 A T G C G A T C T C G A C G T A A C T G T A C G G A C T A G C T C T G A T C G A A G T C T A G C A C G T
A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CCAAGGTTAACCT-
TATTCAAGGTCATGCGA
 A C G T A C G T A C G T A T G C G A T C T C G A C G T A A C T G T A C G G A C T A G C T C T G A T C G A A G T C T A G C A C G T A C G T
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

NR1H2::RXRA/MA0115.1/Jaspar

Match Rank:10
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------CCAAGGTTAACCT
AAAGGTCAAAGGTCAAC--
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C T C G A C G T A A C T G T A C G G A C T A G C T C T G A T C G A A G T C T A G C A C G T
G T C A C T G A C T G A A C T G A C T G A C G T A G T C C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A C G T A A T G C A C G T A C G T