Information for 5-TATCCACTCATTT (Motif 7)

A C G T C G T A A C G T A G T C A G T C C G T A G T A C A C G T A T G C C G T A A G C T A G C T A C G T
Reverse Opposite:
C G T A C T G A C T G A A C G T A T C G C G T A A C T G A C G T A C T G A C T G C G T A A C G T C G T A
p-value:1e-11
log p-value:-2.537e+01
Information Content per bp:1.933
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets62.0 +/- 13.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF354C/MA0130.1/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TATCCACTCATTT
-ATCCAC------
 A C G T C G T A A C G T A G T C A G T C C G T A G T A C A C G T A T G C C G T A A G C T A G C T A C G T
A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TATCCACTCATTT
ACTAGCCAATCA---
 A C G T A C G T A C G T C G T A A C G T A G T C A G T C C G T A G T A C A C G T A T G C C G T A A G C T A G C T A C G T
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TATCCACTCATTT
-AGCCACTCAAG-
 A C G T C G T A A C G T A G T C A G T C C G T A G T A C A C G T A T G C C G T A A G C T A G C T A C G T
A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TATCCACTCATTT-
NNCATTCATTCATNNN
 A C G T A C G T A C G T C G T A A C G T A G T C A G T C C G T A G T A C A C G T A T G C C G T A A G C T A G C T A C G T A C G T
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:5
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TATCCACTCATTT
CTTATCTCHMCATCT
 A C G T A C G T A C G T C G T A A C G T A G T C A G T C C G T A G T A C A C G T A T G C C G T A A G C T A G C T A C G T
A T G C G A C T C G A T C G T A A C G T A G T C C G A T A G T C G A T C G T C A T A G C C G T A A C G T A G T C C G A T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TATCCACTCATTT
-AASCACTCAA--
 A C G T C G T A A C G T A G T C A G T C C G T A G T A C A C G T A T G C C G T A A G C T A G C T A C G T
A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TATCCACTCATTT
-MRSCACTYAA--
 A C G T C G T A A C G T A G T C A G T C C G T A G T A C A C G T A T G C C G T A A G C T A G C T A C G T
A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T

PH0004.1_Nkx3-2/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TATCCACTCATTT--
CATAACCACTTAACAAC
 A C G T A C G T A C G T C G T A A C G T A G T C A G T C C G T A G T A C A C G T A T G C C G T A A G C T A G C T A C G T A C G T A C G T
T G A C G C T A C G A T T C G A G C T A T A G C A G T C C G T A G T A C A G C T A G C T G C T A C G T A T A G C T G C A G T C A G A T C

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TATCCACTCATTT--
CTTAACCACTTAAGGAT
 A C G T A C G T A C G T C G T A A C G T A G T C A G T C C G T A G T A C A C G T A T G C C G T A A G C T A G C T A C G T A C G T A C G T
G T A C G C A T C G A T T C G A C T G A T A G C A G T C C G T A G T A C A C G T A G C T C G T A C G T A T A C G A C T G T C G A A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TATCCACTCATTT
ATTTTCCATT-----
 A C G T A C G T A C G T C G T A A C G T A G T C A G T C C G T A G T A C A C G T A T G C C G T A A G C T A G C T A C G T
C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T A C G T A C G T A C G T A C G T A C G T