Information for 18-ATGCATATGTGAG (Motif 24)

C G T A A C G T C T A G A G T C C G T A A C G T C G T A A C G T A C T G A C G T A C T G C G T A A C T G
Reverse Opposite:
A G T C C G A T A G T C C G T A A G T C C G T A G A C T G T C A A C G T A C T G A G T C C G T A A C G T
p-value:1e-8
log p-value:-1.965e+01
Information Content per bp:1.889
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.51%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.4 +/- 23.9bp
Average Position of motif in Background65.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bhlha15/MA0607.1/Jaspar

Match Rank:1
Score:0.69
Offset:2
Orientation:forward strand
Alignment:ATGCATATGTGAG
--CCATATGT---
 C G T A A C G T C T A G A G T C C G T A A C G T C G T A A C G T A C T G A C G T A C T G C G T A A C T G
A C G T A C G T T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T A C G T A C G T A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:2
Score:0.67
Offset:0
Orientation:forward strand
Alignment:ATGCATATGTGAG
ATGMATATDC---
 C G T A A C G T C T A G A G T C C G T A A C G T C G T A A C G T A C T G A C G T A C T G C G T A A C T G
G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C A C G T A C G T A C G T

Twist2/MA0633.1/Jaspar

Match Rank:3
Score:0.67
Offset:1
Orientation:forward strand
Alignment:ATGCATATGTGAG
-ACCATATGTT--
 C G T A A C G T C T A G A G T C C G T A A C G T C G T A A C G T A C T G A C G T A C T G C G T A A C T G
A C G T C T G A G T A C A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C G T A C G T A C G T

ZBTB18/MA0698.1/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-ATGCATATGTGAG
CATCCAGATGTTC-
 A C G T C G T A A C G T C T A G A G T C C G T A A C G T C G T A A C G T A C T G A C G T A C T G C G T A A C T G
G T A C C G T A A C G T T G A C G T A C C G T A A T C G G T C A A C G T C T A G G A C T C A G T A G T C A C G T

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:5
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--ATGCATATGTGAG
AYATGYATATGCATR
 A C G T A C G T C G T A A C G T C T A G A G T C C G T A A C G T C G T A A C G T A C T G A C G T A C T G C G T A A C T G
C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G C A T C T A G

POU2F2/MA0507.1/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--ATGCATATGTGAG
ATATGCAAATNNN--
 A C G T A C G T C G T A A C G T C T A G A G T C C G T A A C G T C G T A A C G T A C T G A C G T A C T G C G T A A C T G
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A A C G T A C G T

PH0148.1_Pou3f3/Jaspar

Match Rank:7
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------ATGCATATGTGAG
TNNATTATGCATANNTT--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C T A G A G T C C G T A A C G T C G T A A C G T A C T G A C G T A C T G C G T A A C T G
G C A T G C A T G A C T G T C A C G A T C G A T C G T A A G C T C A T G G T A C C T G A C G A T C T G A G C A T G A C T C G A T C G A T A C G T A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-ATGCATATGTGAG
WATGCAAATGAG--
 A C G T C G T A A C G T C T A G A G T C C G T A A C G T C G T A A C G T A C T G A C G T A C T G C G T A A C T G
G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G A C G T A C G T

Pou2f3/MA0627.1/Jaspar

Match Rank:9
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----ATGCATATGTGAG
TTGTATGCAAATTAGA-
 A C G T A C G T A C G T A C G T C G T A A C G T C T A G A G T C C G T A A C G T C G T A A C G T A C T G A C G T A C T G C G T A A C T G
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A A C G T

PH0145.1_Pou2f3/Jaspar

Match Rank:10
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----ATGCATATGTGAG
TTGTATGCAAATTAGA-
 A C G T A C G T A C G T A C G T C G T A A C G T C T A G A G T C C G T A A C G T C G T A A C G T A C T G A C G T A C T G C G T A A C T G
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A A C G T