Information for 5-TMCGKGAAMRTGY (Motif 9)

A G C T G T A C A G T C A C T G A C T G A C T G C G T A C G T A G T C A T C G A C G A T A C T G G A C T
Reverse Opposite:
C T G A A G T C C G T A A G C T A C G T A C G T A C G T A G T C G T A C A G T C C T A G C A T G C T G A
p-value:1e-10
log p-value:-2.491e+01
Information Content per bp:1.827
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.6 +/- 23.9bp
Average Position of motif in Background77.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TMCGKGAAMRTGY
CTTCCNGGAA-----
 A C G T A C G T A G C T G T A C A G T C A C T G A C T G A C T G C G T A C G T A G T C A T C G A C G A T A C T G G A C T
A G T C G A C T C A G T G T A C A G T C A T C G T C A G A C T G G T C A C G T A A C G T A C G T A C G T A C G T A C G T

STAT1/MA0137.3/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TMCGKGAAMRTGY
TTTCCAGGAAA----
 A C G T A C G T A G C T G T A C A G T C A C T G A C T G A C T G C G T A C G T A G T C A T C G A C G A T A C T G G A C T
A C G T A G C T A C G T T G A C G A T C C T G A C T A G C A T G C T G A G T C A C T G A A C G T A C G T A C G T A C G T

Stat4/MA0518.1/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TMCGKGAAMRTGY
TTTCCAGGAAATGG-
 A C G T A C G T A G C T G T A C A G T C A C T G A C T G A C T G C G T A C G T A G T C A T C G A C G A T A C T G G A C T
A G C T G C A T C A G T T G A C G A T C C T G A C T A G C T A G C G T A C G T A T C G A A G C T T A C G T C A G A C G T

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:4
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TMCGKGAAMRTGY
NTTTCCNGGAAA----
 A C G T A C G T A C G T A G C T G T A C A G T C A C T G A C T G A C T G C G T A C G T A G T C A T C G A C G A T A C T G G A C T
T C A G A G C T A C G T A C G T G T A C G A T C C G T A C T A G C A T G G T C A C G T A T C G A A C G T A C G T A C G T A C G T

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer

Match Rank:5
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----TMCGKGAAMRTGY
NATTTCCNGGAAAT---
 A C G T A C G T A C G T A C G T A G C T G T A C A G T C A C T G A C T G A C T G C G T A C G T A G T C A T C G A C G A T A C T G G A C T
A T G C C T G A G A C T A C G T A C G T G T A C G A T C C G A T C T A G C A T G C G T A C G T A C T G A G A C T A C G T A C G T A C G T

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:6
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----TMCGKGAAMRTGY
NNCTTCCNGGAAGN---
 A C G T A C G T A C G T A C G T A G C T G T A C A G T C A C T G A C T G A C T G C G T A C G T A G T C A T C G A C G A T A C T G G A C T
A T G C T C G A A G T C A G C T A C G T G T A C A G T C G C T A C T A G C A T G G T C A C T G A T C A G A G T C A C G T A C G T A C G T

STAT3/MA0144.2/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TMCGKGAAMRTGY
CTTCTGGGAAA----
 A C G T A C G T A G C T G T A C A G T C A C T G A C T G A C T G C G T A C G T A G T C A T C G A C G A T A C T G G A C T
A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A A C G T A C G T A C G T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TMCGKGAAMRTGY
GAAAGTGAAAGT--
 A C G T A G C T G T A C A G T C A C T G A C T G A C T G C G T A C G T A G T C A T C G A C G A T A C T G G A C T
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T A C G T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TMCGKGAAMRTGY
TTCTTGGAAAN---
 A C G T A G C T G T A C A G T C A C T G A C T G A C T G C G T A C G T A G T C A T C G A C G A T A C T G G A C T
A G C T C G A T A G T C G A C T C A G T C T A G C T A G C T G A C G T A T C G A G A C T A C G T A C G T A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TMCGKGAAMRTGY
AGAAAGTGAAAGTGA
 A C G T A C G T A G C T G T A C A G T C A C T G A C T G A C T G C G T A C G T A G T C A T C G A C G A T A C T G G A C T
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A