Information for 2-AAAGGGMWGAAGT (Motif 6)

C G T A C G T A C G T A C T A G A C T G A C T G G T A C C G A T A T C G C G T A C T G A A C T G A C G T
Reverse Opposite:
G T C A T G A C A G C T A C G T A T G C C G T A A C T G A G T C A G T C A G T C A C G T A C G T A C G T
p-value:1e-10
log p-value:-2.522e+01
Information Content per bp:1.848
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.29%
Number of Background Sequences with motif29.5
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets43.6 +/- 29.8bp
Average Position of motif in Background40.3 +/- 21.6bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPI1/MA0080.4/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AAAGGGMWGAAGT-
AAAAAGCGGAAGTA
 C G T A C G T A C G T A C T A G A C T G A C T G G T A C C G A T A T C G C G T A C T G A A C T G A C G T A C G T
T C G A C T G A C G T A C G T A C G T A T A C G T G A C C T A G A T C G G T C A C G T A A T C G G A C T C G T A

PH0125.1_Obox5_2/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AAAGGGMWGAAGT---
NANAGGGATTAATTATN
 A C G T C G T A C G T A C G T A C T A G A C T G A C T G G T A C C G A T A T C G C G T A C T G A A C T G A C G T A C G T A C G T A C G T
T C G A C T G A T C A G T C G A T C A G T C A G A C T G G C T A A C G T C G A T C G T A C G T A G C A T G A C T T C G A G C A T T G A C

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:3
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----AAAGGGMWGAAGT
ANGNAAAGGTCA-----
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A C T A G A C T G A C T G G T A C C G A T A T C G C G T A C T G A A C T G A C G T
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AAAGGGMWGAAGT
CAAAGGTCAG----
 A C G T C G T A C G T A C G T A C T A G A C T G A C T G G T A C C G A T A T C G C G T A C T G A A C T G A C G T
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T A C G T A C G T

PH0124.1_Obox5_1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AAAGGGMWGAAGT---
TAGAGGGATTAAATTTC
 A C G T C G T A C G T A C G T A C T A G A C T G A C T G G T A C C G A T A T C G C G T A C T G A A C T G A C G T A C G T A C G T A C G T
G C A T C T G A T C A G T C G A T C A G C T A G C A T G C G T A A C G T C G A T C G T A C G T A G C T A G A C T A G C T G C A T G T A C

PH0121.1_Obox1/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AAAGGGMWGAAGT--
TTAAGGGGATTAACTAC
 A C G T A C G T C G T A C G T A C G T A C T A G A C T G A C T G G T A C C G A T A T C G C G T A C T G A A C T G A C G T A C G T A C G T
C A G T C G A T T C G A T C G A C T A G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C G T A G T A C C G A T G C T A A G T C

PH0130.1_Otx2/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AAAGGGMWGAAGT---
TGTAGGGATTAATTGTC
 A C G T C G T A C G T A C G T A C T A G A C T G A C T G G T A C C G A T A T C G C G T A C T G A A C T G A C G T A C G T A C G T A C G T
C A G T C T A G C G A T T C G A T C A G T C A G C A T G G T C A C G A T C G A T C G T A C T G A A G C T G A C T C T A G C A G T G A T C

PB0049.1_Nr2f2_1/Jaspar

Match Rank:8
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----AAAGGGMWGAAGT
TCTCAAAGGTCACGAG-
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A C T A G A C T G A C T G G T A C C G A T A T C G C G T A C T G A A C T G A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:9
Score:0.56
Offset:-7
Orientation:forward strand
Alignment:-------AAAGGGMWGAAGT
GTAGGGCAAAGGTCA-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C T A G A C T G A C T G G T A C C G A T A T C G C G T A C T G A A C T G A C G T
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T A C G T A C G T A C G T A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:10
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----AAAGGGMWGAAGT
GGAGAAAGGTGCGA---
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A C T A G A C T G A C T G G T A C C G A T A T C G C G T A C T G A A C T G A C G T
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A A C G T A C G T A C G T