Information for 3-GTTTGTGCAGAAA (Motif 9)

A C T G C G A T A C G T A C G T A C T G A C G T A C T G A G T C C G T A C T A G C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T G A T C A C G T A C T G G T A C C G T A A G T C C G T A C G T A C G T A A G T C
p-value:1e-8
log p-value:-1.923e+01
Information Content per bp:1.944
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.35%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.2 +/- 25.0bp
Average Position of motif in Background21.4 +/- 11.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0026.1_Gm397_1/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GTTTGTGCAGAAA--
NNGTATGTGCACATNNN
 A C G T A C G T A C T G C G A T A C G T A C G T A C T G A C G T A C T G A G T C C G T A C T A G C G T A C G T A C G T A A C G T A C G T
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G

PB0104.1_Zscan4_1/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GTTTGTGCAGAAA---
TACATGTGCACATAAAA
 A C G T A C T G C G A T A C G T A C G T A C T G A C G T A C T G A G T C C G T A C T A G C G T A C G T A C G T A A C G T A C G T A C G T
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

PB0145.1_Mafb_2/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GTTTGTGCAGAAA---
-CAATTGCAAAAATAT
 A C T G C G A T A C G T A C G T A C T G A C G T A C T G A G T C C G T A C T A G C G T A C G T A C G T A A C G T A C G T A C G T
A C G T G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T

PB0130.1_Gm397_2/Jaspar

Match Rank:4
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----GTTTGTGCAGAAA
NNGCGTGTGTGCNGCN-
 A C G T A C G T A C G T A C G T A C T G C G A T A C G T A C G T A C T G A C G T A C T G A G T C C G T A C T A G C G T A C G T A C G T A
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T A C G T

STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer

Match Rank:5
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GTTTGTGCAGAAA-
--TTCTNNAGAANT
 A C T G C G A T A C G T A C G T A C T G A C G T A C T G A G T C C G T A C T A G C G T A C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A G T C G A C T A G C T C T G A C T G A C T A G C G T A C G T A T C G A G A C T

Stat6/MA0520.1/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GTTTGTGCAGAAA--
ANTTCTCAGGAANNN
 A C T G C G A T A C G T A C G T A C T G A C G T A C T G A G T C C G T A C T A G C G T A C G T A C G T A A C G T A C G T
C T G A A C G T A G C T A C G T G T A C G A C T A T G C G C T A C T A G C A T G C G T A C G T A T C G A G C A T T A C G

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:7
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GTTTGTGCAGAAA
--TTCCKNAGAA-
 A C T G C G A T A C G T A C G T A C T G A C G T A C T G A G T C C G T A C T A G C G T A C G T A C G T A
A C G T A C G T G A C T C A G T G A T C G A T C A C G T G A T C C T G A T A C G C G T A G T C A A C G T

PH0148.1_Pou3f3/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GTTTGTGCAGAAA--
TNNATTATGCATANNTT
 A C G T A C G T A C T G C G A T A C G T A C G T A C T G A C G T A C T G A G T C C G T A C T A G C G T A C G T A C G T A A C G T A C G T
G C A T G C A T G A C T G T C A C G A T C G A T C G T A A G C T C A T G G T A C C T G A C G A T C T G A G C A T G A C T C G A T C G A T

CEBPA/MA0102.3/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GTTTGTGCAGAAA
NATTGTGCAAT--
 A C T G C G A T A C G T A C G T A C T G A C G T A C T G A G T C C G T A C T A G C G T A C G T A C G T A
C A G T T C G A A C G T A C G T C T A G A C G T A C T G G T A C C G T A C G T A A G C T A C G T A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:10
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----GTTTGTGCAGAAA
CNNNTATTGTTCNNNNN
 A C G T A C G T A C G T A C G T A C T G C G A T A C G T A C G T A C T G A C G T A C T G A G T C C G T A C T A G C G T A C G T A C G T A
A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A