Information for 2-TAATCAGTAAMAG (Motif 6)

C A G T C G T A G T C A C G A T A T G C C G T A A C T G A C G T C T G A C T G A G T A C C G T A A C T G
Reverse Opposite:
G T A C A C G T A C T G A G C T A G C T G T C A G T A C A C G T T A C G C G T A A C G T A C G T G C T A
p-value:1e-9
log p-value:-2.124e+01
Information Content per bp:1.737
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif3.04%
Number of Background Sequences with motif68.2
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets52.2 +/- 18.7bp
Average Position of motif in Background49.0 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer

Match Rank:1
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-TAATCAGTAAMAG
TTAATNATTAAC--
 A C G T C A G T C G T A G T C A C G A T A T G C C G T A A C T G A C G T C T G A C T G A G T A C C G T A A C T G
A C G T G A C T T C G A G T C A G C A T T A G C C G T A C A G T A G C T C G T A T G C A G A T C A C G T A C G T

HNF1A/MA0046.2/Jaspar

Match Rank:2
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---TAATCAGTAAMAG
AGTTAATGATTAACT-
 A C G T A C G T A C G T C A G T C G T A G T C A C G A T A T G C C G T A A C T G A C G T C T G A C T G A G T A C C G T A A C T G
C T G A C T A G A G C T G C A T C T G A G T C A G C A T T A C G C G T A C A G T G A C T C G T A T C G A G T A C G C A T A C G T

HNF1B/MA0153.2/Jaspar

Match Rank:3
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--TAATCAGTAAMAG
GTTAATNATTAAC--
 A C G T A C G T C A G T C G T A G T C A C G A T A T G C C G T A A C T G A C G T C T G A C T G A G T A C C G T A A C T G
C T A G A G C T G A C T C T G A G T C A G C A T A T G C C G T A C A G T G A C T C G T A T C G A G T A C A C G T A C G T

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:4
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---TAATCAGTAAMAG
GGTTAAACATTAA---
 A C G T A C G T A C G T C A G T C G T A G T C A C G A T A T G C C G T A A C T G A C G T C T G A C T G A G T A C C G T A A C T G
C T A G C T A G G C A T C G A T C T G A G T C A G C T A A T G C C G T A C A G T G A C T C G T A T G C A A C G T A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:5
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TAATCAGTAAMAG--
---TGAGTGACAGSC
 C A G T C G T A G T C A C G A T A T G C C G T A A C T G A C G T C T G A C T G A G T A C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

PH0039.1_Mnx1/Jaspar

Match Rank:6
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----TAATCAGTAAMAG
GTACTAATTAGTGGCG-
 A C G T A C G T A C G T A C G T C A G T C G T A G T C A C G A T A T G C C G T A A C T G A C G T C T G A C T G A G T A C C G T A A C T G
A C T G A C G T T G C A A T G C G A C T G T C A C G T A G A C T A C G T C T G A A T C G A C G T C T A G T A C G G A T C T A C G A C G T

PH0133.1_Pax7/Jaspar

Match Rank:7
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----TAATCAGTAAMAG
CGAACTAATTAGTACTA-
 A C G T A C G T A C G T A C G T A C G T C A G T C G T A G T C A C G A T A T G C C G T A A C T G A C G T C T G A C T G A G T A C C G T A A C T G
G T A C T A C G G C T A G T A C G A T C G A C T T C G A C G T A G C A T A G C T C T G A C T A G A C G T G C T A T G A C C A G T C T G A A C G T

EVX1/MA0887.1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TAATCAGTAAMAG
GNTAATTANN-----
 A C G T A C G T C A G T C G T A G T C A C G A T A T G C C G T A A C T G A C G T C T G A C T G A G T A C C G T A A C T G
A T C G T A G C G A C T C T G A T G C A A G C T A G C T C T G A A T G C A G T C A C G T A C G T A C G T A C G T A C G T

POU6F1/MA0628.1/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TAATCAGTAAMAG
ATTAATTAAT-----
 A C G T A C G T C A G T C G T A G T C A C G A T A T G C C G T A A C T G A C G T C T G A C T G A G T A C C G T A A C T G
T C G A G A C T G C A T G T C A G T C A A C G T C A G T C G T A C T G A A G C T A C G T A C G T A C G T A C G T A C G T

PH0058.1_Hoxb3/Jaspar

Match Rank:10
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----TAATCAGTAAMAG
TGAGCTAATTAGTTGGA-
 A C G T A C G T A C G T A C G T A C G T C A G T C G T A G T C A C G A T A T G C C G T A A C T G A C G T C T G A C T G A G T A C C G T A A C T G
C G A T T C A G T G C A T A C G A T G C G A C T G T C A C G T A C G A T A C G T C T G A T A C G A G C T C A G T T C A G C T A G C G T A A C G T