Information for 1-TGGCTGCTGGTTTTGT (Motif 1)

A G C T A C T G A C T G G T A C A C G T A C T G A G T C A C G T C T A G A C T G C G A T A C G T A G C T A C G T A C T G C A G T
Reverse Opposite:
G T C A T G A C C G T A C T G A C G T A C G T A A G T C A G T C C G T A C T A G A G T C G T C A A C T G G T A C A G T C C T G A
p-value:1e-10
log p-value:-2.481e+01
Information Content per bp:1.785
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif2.03%
Number of Background Sequences with motif8.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets50.2 +/- 24.1bp
Average Position of motif in Background49.4 +/- 15.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0149.1_Myb_2/Jaspar

Match Rank:1
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TGGCTGCTGGTTTTGT
NNNTGGCAGTTGGTNN---
 A C G T A C G T A C G T A G C T A C T G A C T G G T A C A C G T A C T G A G T C A C G T C T A G A C T G C G A T A C G T A G C T A C G T A C T G C A G T
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G A C G T A C G T A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:2
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TGGCTGCTGGTTTTGT
TGGCAGTTGG------
 A G C T A C T G A C T G G T A C A C G T A C T G A G T C A C G T C T A G A C T G C G A T A C G T A G C T A C G T A C T G C A G T
G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G A C G T A C G T A C G T A C G T A C G T A C G T

PB0150.1_Mybl1_2/Jaspar

Match Rank:3
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TGGCTGCTGGTTTTGT
CACGGCAGTTGGTNN---
 A C G T A C G T A G C T A C T G A C T G G T A C A C G T A C T G A G T C A C G T C T A G A C T G C G A T A C G T A G C T A C G T A C T G C A G T
T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G A C G T A C G T A C G T

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:4
Score:0.53
Offset:1
Orientation:forward strand
Alignment:TGGCTGCTGGTTTTGT
-GGCVGTTR-------
 A G C T A C T G A C T G G T A C A C G T A C T G A G T C A C G T C T A G A C T G C G A T A C G T A G C T A C G T A C T G C A G T
A C G T C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Myb/MA0100.2/Jaspar

Match Rank:5
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TGGCTGCTGGTTTTGT
TGGCAGTTGN------
 A G C T A C T G A C T G G T A C A C G T A C T G A G T C A C G T C T A G A C T G C G A T A C G T A G C T A C G T A C T G C A G T
C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G A C G T A C G T A C G T A C G T A C G T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:6
Score:0.52
Offset:1
Orientation:forward strand
Alignment:TGGCTGCTGGTTTTGT
-GAATGTTTGTTT---
 A G C T A C T G A C T G G T A C A C G T A C T G A G T C A C G T C T A G A C T G C G A T A C G T A G C T A C G T A C T G C A G T
A C G T C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T A C G T A C G T A C G T

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.52
Offset:2
Orientation:forward strand
Alignment:TGGCTGCTGGTTTTGT--
--NNTGTTTATTTTGGCA
 A G C T A C T G A C T G G T A C A C G T A C T G A G T C A C G T C T A G A C T G C G A T A C G T A G C T A C G T A C T G C A G T A C G T A C G T
A C G T A C G T C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A

MEF2C/MA0497.1/Jaspar

Match Rank:8
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:TGGCTGCTGGTTTTGT---
----TTCTATTTTTAGNNN
 A G C T A C T G A C T G G T A C A C G T A C T G A G T C A C G T C T A G A C T G C G A T A C G T A G C T A C G T A C T G C A G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

PH0170.1_Tgif2/Jaspar

Match Rank:9
Score:0.50
Offset:-4
Orientation:reverse strand
Alignment:----TGGCTGCTGGTTTTGT
GTATTGACAGCTNNTT----
 A C G T A C G T A C G T A C G T A G C T A C T G A C T G G T A C A C G T A C T G A G T C A C G T C T A G A C T G C G A T A C G T A G C T A C G T A C T G C A G T
A C T G A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C A T G T A G C G A C T T C G A T A C G G C A T C G A T A C G T A C G T A C G T A C G T

RREB1/MA0073.1/Jaspar

Match Rank:10
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---TGGCTGCTGGTTTTGT-
NGGGGGGGGGTGGTTTGGGG
 A C G T A C G T A C G T A G C T A C T G A C T G G T A C A C G T A C T G A G T C A C G T C T A G A C T G C G A T A C G T A G C T A C G T A C T G C A G T A C G T
A C G T A T C G C A T G A C T G C A T G A C T G A C T G A C T G A C T G A C T G A C G T A C T G C A T G A C G T A C G T A C G T A C T G A C T G A C T G A C T G