Information for 5-RGCAGGCAGRAAG (Motif 8)

C T A G A C T G A G T C G T C A A C T G A C T G A G T C C G T A A C T G C T A G G T C A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T A G T C A G T C A C G T A C T G A G T C A G T C A C G T A C T G A G T C A G T C
p-value:1e-5
log p-value:-1.172e+01
Information Content per bp:1.922
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif4.26%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.5 +/- 17.5bp
Average Position of motif in Background46.4 +/- 21.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:1
Score:0.64
Offset:5
Orientation:forward strand
Alignment:RGCAGGCAGRAAG--
-----ACAGGAAGTG
 C T A G A C T G A G T C G T C A A C T G A C T G A G T C C G T A A C T G C T A G G T C A C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:RGCAGGCAGRAAG-----
GGAAGGAAGGAAGGAAGG
 C T A G A C T G A G T C G T C A A C T G A C T G A G T C C G T A A C T G C T A G G T C A C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C T G C T A G C T G A C T G A C T A G C T A G C T G A C T G A A C T G A T C G T G C A C G T A A C T G A T C G G T C A C T G A C T A G T A C G

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:3
Score:0.63
Offset:2
Orientation:forward strand
Alignment:RGCAGGCAGRAAG
--CWGGCGGGAA-
 C T A G A C T G A G T C G T C A A C T G A C T G A G T C C G T A A C T G C T A G G T C A C G T A A C T G
A C G T A C G T T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:4
Score:0.62
Offset:5
Orientation:forward strand
Alignment:RGCAGGCAGRAAG--
-----ACAGGAAGTG
 C T A G A C T G A G T C G T C A A C T G A C T G A G T C C G T A A C T G C T A G G T C A C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T A G C T G C A A C T G A C T G C G T A C G T A C T A G G A C T T A C G

ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer

Match Rank:5
Score:0.58
Offset:4
Orientation:forward strand
Alignment:RGCAGGCAGRAAG-
----AACCGGAAGT
 C T A G A C T G A G T C G T C A A C T G A C T G A G T C C G T A A C T G C T A G G T C A C G T A A C T G A C G T
A C G T A C G T A C G T A C G T T C G A C T G A T A G C T G A C T C A G T C A G C G T A C G T A T C A G A G C T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.58
Offset:4
Orientation:forward strand
Alignment:RGCAGGCAGRAAG-
----AACAGGAAGT
 C T A G A C T G A G T C G T C A A C T G A C T G A G T C C G T A A C T G C T A G G T C A C G T A A C T G A C G T
A C G T A C G T A C G T A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:7
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:RGCAGGCAGRAAG---
----NDCAGGAARTNN
 C T A G A C T G A G T C G T C A A C T G A C T G A G T C C G T A A C T G C T A G G T C A C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G

GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer

Match Rank:8
Score:0.58
Offset:4
Orientation:forward strand
Alignment:RGCAGGCAGRAAG-
----NACCGGAAGT
 C T A G A C T G A G T C G T C A A C T G A C T G A G T C C G T A A C T G C T A G G T C A C G T A A C T G A C G T
A C G T A C G T A C G T A C G T T C G A T C G A T A G C G T A C T C A G T A C G C G T A C G T A T C A G A G C T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.58
Offset:4
Orientation:forward strand
Alignment:RGCAGGCAGRAAG-
----NACAGGAAAT
 C T A G A C T G A G T C G T C A A C T G A C T G A G T C C G T A A C T G C T A G G T C A C G T A A C T G A C G T
A C G T A C G T A C G T A C G T T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T

E2F6/MA0471.1/Jaspar

Match Rank:10
Score:0.57
Offset:3
Orientation:forward strand
Alignment:RGCAGGCAGRAAG-
---GGGCGGGAAGG
 C T A G A C T G A G T C G T C A A C T G A C T G A G T C C G T A A C T G C T A G G T C A C G T A A C T G A C G T
A C G T A C G T A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G