Information for 3-TTAATCAATYWATYCT (Motif 3)

A C G T A C G T C G T A C G T A A C G T G A T C C G T A G T C A C G A T A G C T G C A T C T G A G A C T A G C T G T A C C G A T
Reverse Opposite:
C G T A A C T G T C G A C G T A A G C T C G T A T C A G C G T A A C G T A C G T C A T G G T C A A C G T C G A T G T C A C G T A
p-value:1e-10
log p-value:-2.380e+01
Information Content per bp:1.689
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif10.64%
Number of Background Sequences with motif23.3
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets36.2 +/- 24.3bp
Average Position of motif in Background50.9 +/- 19.1bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0146.1_Pou3f1/Jaspar

Match Rank:1
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---TTAATCAATYWATYCT
NANTTAATTAATTANNN--
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T G A T C C G T A G T C A C G A T A G C T G C A T C T G A G A C T A G C T G T A C C G A T
C A T G G C T A T G C A A G C T C A G T G T C A G C T A C G A T C G A T G C T A C G T A C A G T C A G T G T C A T C G A A C G T G A C T A C G T A C G T

PH0173.1_Uncx/Jaspar

Match Rank:2
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----TTAATCAATYWATYCT
CNCNTTAATTAATTANN---
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T G A T C C G T A G T C A C G A T A G C T G C A T C T G A G A C T A G C T G T A C C G A T
T G A C A T C G A G T C T C A G A G C T G A C T T C G A C G T A G A C T A C G T C T G A C T G A A C G T A G C T C G T A A G C T A C T G A C G T A C G T A C G T

PH0095.1_Lhx5/Jaspar

Match Rank:3
Score:0.71
Offset:-5
Orientation:reverse strand
Alignment:-----TTAATCAATYWATYCT
ANNATTTAATTAATTNN----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T G A T C C G T A G T C A C G A T A G C T G C A T C T G A G A C T A G C T G T A C C G A T
T C G A C A T G C A G T C G T A C G A T G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G A C T C A G T G A T C A T C G A C G T A C G T A C G T A C G T

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:4
Score:0.71
Offset:1
Orientation:forward strand
Alignment:TTAATCAATYWATYCT
-TAATCAATTA-----
 A C G T A C G T C G T A C G T A A C G T G A T C C G T A G T C A C G A T A G C T G C A T C T G A G A C T A G C T G T A C C G A T
A C G T C G A T C T G A C G T A A G C T A G T C T G C A C T G A A C G T A G C T G C T A A C G T A C G T A C G T A C G T A C G T

PH0149.1_Pou3f4/Jaspar

Match Rank:5
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---TTAATCAATYWATYCT
GANTTAATTAATTAANN--
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T G A T C C G T A G T C A C G A T A G C T G C A T C T G A G A C T A G C T G T A C C G A T
C T A G G C T A G T C A G A C T C G A T G T C A G C T A C G A T C G A T G C T A C G T A C A G T C A G T G T C A C G T A A C G T G A C T A C G T A C G T

PH0093.1_Lhx3/Jaspar

Match Rank:6
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----TTAATCAATYWATYCT
NNTATTTAATTAATTNN----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T G A T C C G T A G T C A C G A T A G C T G C A T C T G A G A C T A G C T G T A C C G A T
T G C A C A G T C A G T G C T A G C A T G A C T G A C T C T G A C G T A C G A T A G C T C T G A C T G A A G C T C A G T G C A T A T G C A C G T A C G T A C G T A C G T

PH0101.1_Lmx1b/Jaspar

Match Rank:7
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----TTAATCAATYWATYCT
AGTTTTTAATTAATTTG----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T G A T C C G T A G T C A C G A T A G C T G C A T C T G A G A C T A G C T G T A C C G A T
T C G A C T A G C G A T C G A T G C A T A G C T G A C T G C T A C G T A G C A T C G A T C G T A C T G A C G A T C G A T G A C T A C T G A C G T A C G T A C G T A C G T

PH0153.1_Prop1/Jaspar

Match Rank:8
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----TTAATCAATYWATYCT
GNNTNTTAATTAATNCN----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T G A T C C G T A G T C A C G A T A G C T G C A T C T G A G A C T A G C T G T A C C G A T
C T A G G A C T G C A T G C A T G T A C G A C T G A C T C G T A C G T A G A C T A C G T C T G A C T G A A G C T A C G T A G T C A C T G A C G T A C G T A C G T A C G T

PH0120.1_Nkx6-3/Jaspar

Match Rank:9
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----TTAATCAATYWATYCT
GAAAATTAATTACTTTG----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T G A T C C G T A G T C A C G A T A G C T G C A T C T G A G A C T A G C T G T A C C G A T
C T A G T G C A G C A T C G T A G C T A C G A T G A C T C G T A C G T A C G A T A C G T C T G A T G A C A G C T A C G T A G C T A C T G A C G T A C G T A C G T A C G T

PB0001.1_Arid3a_1/Jaspar

Match Rank:10
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----TTAATCAATYWATYCT
GGGTTTAATTAAAATTC---
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T G A T C C G T A G T C A C G A T A G C T G C A T C T G A G A C T A G C T G T A C C G A T
T A C G A C T G A C T G G C A T G A C T A G C T C T G A C G T A C G A T G A C T T C G A C T G A C G T A G T C A G A C T G C A T G A T C A C G T A C G T A C G T