Information for 5-GAGGGTAAGA (Motif 9)

C T A G C T G A C T A G A C T G A C T G G A C T C T G A C G T A C T A G C G T A
Reverse Opposite:
A C G T A G T C A C G T A G C T C T G A A G T C A G T C A G T C A G C T A G T C
p-value:1e-9
log p-value:-2.089e+01
Information Content per bp:1.867
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif3.41%
Number of Background Sequences with motif181.1
Percentage of Background Sequences with motif0.37%
Average Position of motif in Targets49.4 +/- 25.5bp
Average Position of motif in Background49.5 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Spz1/MA0111.1/Jaspar

Match Rank:1
Score:0.73
Offset:1
Orientation:forward strand
Alignment:GAGGGTAAGA--
-AGGGTAACAGC
 C T A G C T G A C T A G A C T G A C T G G A C T C T G A C G T A C T A G C G T A A C G T A C G T
A C G T C T G A A T C G C T A G A C T G C A G T C G T A C G T A T A G C C T G A A C T G T A G C

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GAGGGTAAGA--
-CAGGTAAGTAT
 C T A G C T G A C T A G A C T G A C T G G A C T C T G A C G T A C T A G C G T A A C G T A C G T
A C G T T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GAGGGTAAGA---
ARGAGGMCAAAATGW
 A C G T A C G T C T A G C T G A C T A G A C T G A C T G G A C T C T G A C G T A C T A G C G T A A C G T A C G T A C G T
T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GAGGGTAAGA
GGAGGGGGAA-
 A C G T C T A G C T G A C T A G A C T G A C T G G A C T C T G A C G T A C T A G C G T A
A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A A C G T

THAP1/MA0597.1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GAGGGTAAGA
TNNGGGCAG--
 A C G T C T A G C T G A C T A G A C T G A C T G G A C T C T G A C G T A C T A G C G T A
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GAGGGTAAGA
GGGCGGGAAGG-
 A C G T A C G T C T A G C T G A C T A G A C T G A C T G G A C T C T G A C G T A C T A G C G T A
C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T

GCM2/MA0767.1/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GAGGGTAAGA
TATGCGGGTA---
 A C G T A C G T A C G T C T A G C T G A C T A G A C T G A C T G G A C T C T G A C G T A C T A G C G T A
A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A A C G T A C G T A C G T

PB0124.1_Gabpa_2/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GAGGGTAAGA---
NNNNGGGGGAAGANGG
 A C G T A C G T A C G T C T A G C T G A C T A G A C T G A C T G G A C T C T G A C G T A C T A G C G T A A C G T A C G T A C G T
C T A G A C G T A T C G T C G A C T A G C A T G T A C G C T A G C T A G C T G A C G T A C T A G T G C A G A T C C T A G A C T G

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GAGGGTAAGA
--AGGTCA--
 C T A G C T G A C T A G A C T G A C T G G A C T C T G A C G T A C T A G C G T A
A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T

PB0059.1_Six6_1/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GAGGGTAAGA-----
AATAGGGTATCATATAT
 A C G T A C G T C T A G C T G A C T A G A C T G A C T G G A C T C T G A C G T A C T A G C G T A A C G T A C G T A C G T A C G T A C G T
C T G A G C T A C G A T T C G A C T A G A C T G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C G T A C G A T G C T A G A C T