Information for 3-CCTSCCTCTCCCCCCV (Motif 5)

A G T C T A G C A G C T A T C G A G T C A G T C C G A T A G T C A G C T A G T C T A G C G T A C A T G C A G T C A G T C T G A C
Reverse Opposite:
A C T G A C T G C T A G T A C G A C T G A T C G C T A G C T G A C T A G C G T A C T A G C T A G A T G C C T G A A T C G A C T G
p-value:1e-10
log p-value:-2.367e+01
Information Content per bp:1.703
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif3.65%
Number of Background Sequences with motif175.6
Percentage of Background Sequences with motif0.36%
Average Position of motif in Targets59.2 +/- 25.9bp
Average Position of motif in Background50.6 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0100.1_Zfp740_1/Jaspar

Match Rank:1
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CCTSCCTCTCCCCCCV----
----CCCCCCCCCCCACTTG
 A G T C T A G C A G C T A T C G A G T C A G T C C G A T A G T C A G C T A G T C T A G C G T A C A T G C A G T C A G T C T G A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C T A G C A G T C T A G C T G A C G T A C G T A C G A T C G A T C G T A C G T A C G T C A G T A C G C A T G A C T A T C G

PB0124.1_Gabpa_2/Jaspar

Match Rank:2
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CCTSCCTCTCCCCCCV
CCGTCTTCCCCCTCAC
 A G T C T A G C A G C T A T C G A G T C A G T C C G A T A G T C A G C T A G T C T A G C G T A C A T G C A G T C A G T C T G A C
T G A C A G T C C A T G A C G T G A T C G C A T G A C T G A T C A G T C A T G C G T A C G A T C A G C T T A G C T G C A G A T C

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CCTSCCTCTCCCCCCV-------
---GCCTCCTCCMTCWGACTGKS
 A G T C T A G C A G C T A T C G A G T C A G T C C G A T A G T C A G C T A G T C T A G C G T A C A T G C A G T C A G T C T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A C G G A T C G A T C G A C T A G T C A G T C G C A T A G T C A G T C G T A C A G C T A G T C G C T A T C A G C T G A A G T C G A C T T A C G A C T G T A G C

E2F6/MA0471.1/Jaspar

Match Rank:4
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:CCTSCCTCTCCCCCCV
-----NCTTCCCGCCC
 A G T C T A G C A G C T A T C G A G T C A G T C C G A T A G T C A G C T A G T C T A G C G T A C A T G C A G T C A G T C T G A C
A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C

E2F4/MA0470.1/Jaspar

Match Rank:5
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:CCTSCCTCTCCCCCCV
-----NNTTCCCGCCC
 A G T C T A G C A G C T A T C G A G T C A G T C C G A T A G T C A G C T A G T C T A G C G T A C A T G C A G T C A G T C T G A C
A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G C T A G C T A T G C A T G C A G T C A C T G A T G C A T G C T G A C

PB0097.1_Zfp281_1/Jaspar

Match Rank:6
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CCTSCCTCTCCCCCCV--
---TCCCCCCCCCCCCCC
 A G T C T A G C A G C T A T C G A G T C A G T C C G A T A G T C A G C T A G T C T A G C G T A C A T G C A G T C A G T C T G A C A C G T A C G T
A C G T A C G T A C G T C A G T A G T C G T A C G T A C T A G C G T A C G A T C G A T C G T A C G A T C G T A C G T A C G T A C G A T C T G A C

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:7
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:CCTSCCTCTCCCCCCV--
------TTTCCCGCCMAV
 A G T C T A G C A G C T A T C G A G T C A G T C C G A T A G T C A G C T A G T C T A G C G T A C A T G C A G T C A G T C T G A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T G A C T A C G T A T G C A T G C A G T C A C T G A T G C T A G C G T A C T G C A T G A C

SP2/MA0516.1/Jaspar

Match Rank:8
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CCTSCCTCTCCCCCCV
GCCCCGCCCCCTCCC---
 A C G T A C G T A G T C T A G C A G C T A T C G A G T C A G T C C G A T A G T C A G C T A G T C T A G C G T A C A T G C A G T C A G T C T G A C
A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C A C G T A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:9
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----CCTSCCTCTCCCCCCV
BTGACCTCTNNHTGACCY--
 A C G T A C G T A C G T A C G T A G T C T A G C A G C T A T C G A G T C A G T C C G A T A G T C A G C T A G T C T A G C G T A C A T G C A G T C A G T C T G A C
A T C G A C G T A T C G T G C A G T A C A G T C A G C T A T G C C G A T T A C G A T G C G T A C G A C T T A C G T G C A G T A C G A T C A G C T A C G T A C G T

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:10
Score:0.52
Offset:4
Orientation:forward strand
Alignment:CCTSCCTCTCCCCCCV
----VDTTTCCCGCCA
 A G T C T A G C A G C T A T C G A G T C A G T C C G A T A G T C A G C T A G T C T A G C G T A C A T G C A G T C A G T C T G A C
A C G T A C G T A C G T A C G T T A G C C G A T A C G T A G C T A G C T A G T C A T G C A G T C A C T G A T G C A T G C G C T A