Information for 2-TTTACTTCCAAWTCAA (Motif 3)

C G A T A C G T A G C T C T G A A G T C A G C T A C G T A G T C A G T C C G T A C G T A C G A T A C G T A G T C G T C A C G T A
Reverse Opposite:
A C G T A C G T A C T G G T C A C G A T A C G T A C G T T A C G C T A G C G T A C T G A A C T G A G C T C T G A C G T A C G T A
p-value:1e-10
log p-value:-2.525e+01
Information Content per bp:1.814
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.22%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets62.0 +/- 15.3bp
Average Position of motif in Background53.7 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0068.1_Sox1_1/Jaspar

Match Rank:1
Score:0.56
Offset:5
Orientation:forward strand
Alignment:TTTACTTCCAAWTCAA-----
-----AATCAATTCAATAATT
 C G A T A C G T A G C T C T G A A G T C A G C T A C G T A G T C A G T C C G T A C G T A C G A T A C G T A G T C G T C A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C G T A C A G T G A T C G C T A G C T A G C A T C G A T T A G C G C T A G C T A G C A T C G T A G T C A C G A T A C G T

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:2
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---TTTACTTCCAAWTCAA
ASTTTCACTTCC-------
 A C G T A C G T A C G T C G A T A C G T A G C T C T G A A G T C A G C T A C G T A G T C A G T C C G T A C G T A C G A T A C G T A G T C G T C A C G T A
C T G A A T G C G C A T G A C T G A C T A G T C G C T A A T G C G C A T C G A T A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:3
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TTTACTTCCAAWTCAA
TTGACTTTT-------
 C G A T A C G T A G C T C T G A A G T C A G C T A C G T A G T C A G T C C G T A C G T A C G A T A C G T A G T C G T C A C G T A
C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

E2F8/MA0865.1/Jaspar

Match Rank:4
Score:0.52
Offset:0
Orientation:forward strand
Alignment:TTTACTTCCAAWTCAA
TTTCCCGCCAAA----
 C G A T A C G T A G C T C T G A A G T C A G C T A C G T A G T C A G T C C G T A C G T A C G A T A C G T A G T C G T C A C G T A
G A C T A G C T A C G T A G T C A G T C A T G C T A C G A G T C T A G C C T G A C G T A G C T A A C G T A C G T A C G T A C G T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--TTTACTTCCAAWTCAA
GTTTCACTTCCG------
 A C G T A C G T C G A T A C G T A G C T C T G A A G T C A G C T A C G T A G T C A G T C C G T A C G T A C G A T A C G T A G T C G T C A C G T A
A T C G G A C T A C G T A G C T A G T C G C T A A G T C G C A T A C G T A G T C G A T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:6
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--TTTACTTCCAAWTCAA
TGTTTACTTT--------
 A C G T A C G T C G A T A C G T A G C T C T G A A G T C A G C T A C G T A G T C A G T C C G T A C G T A C G A T A C G T A G T C G T C A C G T A
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

E2F7/MA0758.1/Jaspar

Match Rank:7
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-TTTACTTCCAAWTCAA
TTTTCCCGCCAAAA---
 A C G T C G A T A C G T A G C T C T G A A G T C A G C T A C G T A G T C A G T C C G T A C G T A C G A T A C G T A G T C G T C A C G T A
C G A T C G A T A G C T A G C T A T G C A T G C A G T C T C A G A G T C A T G C C G T A C G T A G C T A C G T A A C G T A C G T A C G T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:8
Score:0.51
Offset:7
Orientation:forward strand
Alignment:TTTACTTCCAAWTCAA-
-------HNRAATCAAT
 C G A T A C G T A G C T C T G A A G T C A G C T A C G T A G T C A G T C C G T A C G T A C G A T A C G T A G T C G T C A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--TTTACTTCCAAWTCAA
TGTTTACTTT--------
 A C G T A C G T C G A T A C G T A G C T C T G A A G T C A G C T A C G T A G T C A G T C C G T A C G T A C G A T A C G T A G T C G T C A C G T A
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0037.1_Hdx/Jaspar

Match Rank:10
Score:0.50
Offset:3
Orientation:forward strand
Alignment:TTTACTTCCAAWTCAA----
---AAGGCGAAATCATCGCA
 C G A T A C G T A G C T C T G A A G T C A G C T A C G T A G T C A G T C C G T A C G T A C G A T A C G T A G T C G T C A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A