Information for 5-WYRWYCTAACCWTSAT (Motif 17)

C G T A A G T C C T G A C G A T G A C T A G T C A C G T C G T A C G T A A G T C A G T C C G T A A C G T A T G C C G T A A G C T
Reverse Opposite:
C T G A A C G T A T C G C G T A C G A T A C T G A C T G A C G T A C G T C G T A A C T G C T A G C G T A A G C T C T A G C G A T
p-value:1e-7
log p-value:-1.614e+01
Information Content per bp:1.826
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.5 +/- 26.8bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RORA/MA0071.1/Jaspar

Match Rank:1
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:WYRWYCTAACCWTSAT
------TGACCTTGAT
 C G T A A G T C C T G A C G A T G A C T A G T C A C G T C G T A C G T A A G T C A G T C C G T A A C G T A T G C C G T A A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

Esrrg/MA0643.1/Jaspar

Match Rank:2
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:WYRWYCTAACCWTSAT
-----ATGACCTTGA-
 C G T A A G T C C T G A C G A T G A C T A G T C A C G T C G T A C G T A A G T C A G T C C G T A A C G T A T G C C G T A A G C T
A C G T A C G T A C G T A C G T A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:WYRWYCTAACCWTSAT
--NNACTTACCTN---
 C G T A A G T C C T G A C G A T G A C T A G T C A C G T C G T A C G T A A G T C A G T C C G T A A C G T A T G C C G T A A G C T
A C G T A C G T C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.58
Offset:5
Orientation:forward strand
Alignment:WYRWYCTAACCWTSAT
-----NTGACCTTGA-
 C G T A A G T C C T G A C G A T G A C T A G T C A C G T C G T A C G T A A G T C A G T C C G T A A C G T A T G C C G T A A G C T
A C G T A C G T A C G T A C G T A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:5
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:WYRWYCTAACCWTSAT
----NATGACCTTGA-
 C G T A A G T C C T G A C G A T G A C T A G T C A C G T C G T A C G T A A G T C A G T C C G T A A C G T A T G C C G T A A G C T
A C G T A C G T A C G T A C G T C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A A C G T

PB0172.1_Sox1_2/Jaspar

Match Rank:6
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:WYRWYCTAACCWTSAT--
---NNNTAACAATTATAN
 C G T A A G T C C T G A C G A T G A C T A G T C A C G T C G T A C G T A A G T C A G T C C G T A A C G T A T G C C G T A A G C T A C G T A C G T
A C G T A C G T A C G T A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:7
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:WYRWYCTAACCWTSAT
------TGACCTTGAV
 C G T A A G T C C T G A C G A T G A C T A G T C A C G T C G T A C G T A A G T C A G T C C G T A A C G T A T G C C G T A A G C T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

Nr5a2/MA0505.1/Jaspar

Match Rank:8
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:WYRWYCTAACCWTSAT---
----GCTGACCTTGAACTN
 C G T A A G T C C T G A C G A T G A C T A G T C A C G T C G T A C G T A A G T C A G T C C G T A A C G T A T G C C G T A A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

Crx/MA0467.1/Jaspar

Match Rank:9
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:WYRWYCTAACCWTSAT
-----CTAATCCTCTT
 C G T A A G T C C T G A C G A T G A C T A G T C A C G T C G T A C G T A A G T C A G T C C G T A A C G T A T G C C G T A A G C T
A C G T A C G T A C G T A C G T A C G T G A T C C G A T C T G A C G T A A C G T A G T C G A T C A G C T G A T C G A C T A G C T

PB0045.1_Myb_1/Jaspar

Match Rank:10
Score:0.54
Offset:2
Orientation:forward strand
Alignment:WYRWYCTAACCWTSAT---
--ATGGAAACCGTTATTTT
 C G T A A G T C C T G A C G A T G A C T A G T C A C G T C G T A C G T A A G T C A G T C C G T A A C G T A T G C C G T A A G C T A C G T A C G T A C G T
A C G T A C G T G C T A C G A T C A T G C A T G G T C A C T G A C T G A G T A C A T G C A C T G A C G T G A C T C T G A G C A T G C A T G A C T C G A T