Information for 1-CGATAAACGC (Motif 1)

A G T C A C T G G T C A C G A T C T G A C G T A C G T A A G T C C T A G G T A C
Reverse Opposite:
A C T G A G T C A C T G A C G T A C G T A G C T C G T A A C G T A G T C A C T G
p-value:1e-13
log p-value:-3.079e+01
Information Content per bp:1.878
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.70%
Number of Background Sequences with motif5.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.7 +/- 20.5bp
Average Position of motif in Background39.7 +/- 20.7bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BARHL2/MA0635.1/Jaspar

Match Rank:1
Score:0.71
Offset:1
Orientation:forward strand
Alignment:CGATAAACGC-
-GCTAAACGGT
 A G T C A C T G G T C A C G A T C T G A C G T A C G T A A G T C C T A G G T A C A C G T
A C G T T A C G G A T C C G A T C G T A C G T A C G T A G A T C C T A G T C A G G A C T

MYBL2/MA0777.1/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CGATAAACGC--
AACCGTTAAACGGTC
 A C G T A C G T A C G T A G T C A C T G G T C A C G A T C T G A C G T A C G T A A G T C C T A G G T A C A C G T A C G T
C T G A C T G A T G A C T A G C C T A G C A G T A G C T C G T A T G C A G C T A T G A C A T C G A T C G G A C T G A T C

FOXL1/MA0033.2/Jaspar

Match Rank:3
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CGATAAACGC
--GTAAACA-
 A G T C A C T G G T C A C G A T C T G A C G T A C G T A A G T C C T A G G T A C
A C G T A C G T C T A G G A C T T G C A G T C A T G C A A G T C G T C A A C G T

FOXG1/MA0613.1/Jaspar

Match Rank:4
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CGATAAACGC
--GTAAACAA
 A G T C A C T G G T C A C G A T C T G A C G T A C G T A A G T C C T A G G T A C
A C G T A C G T C T A G A C G T C G T A C G T A C G T A A G T C C G T A G C T A

FOXD2/MA0847.1/Jaspar

Match Rank:5
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CGATAAACGC
--GTAAACA-
 A G T C A C T G G T C A C G A T C T G A C G T A C G T A A G T C C T A G G T A C
A C G T A C G T T C A G G A C T G T C A G T C A C G T A A G T C C T G A A C G T

Foxj2/MA0614.1/Jaspar

Match Rank:6
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CGATAAACGC
--GTAAACAA
 A G T C A C T G G T C A C G A T C T G A C G T A C G T A A G T C C T A G G T A C
A C G T A C G T C T A G G C A T G T C A C G T A C G T A A G T C C G T A C G T A

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:7
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CGATAAACGC
WWATRTAAACAN
 A C G T A C G T A G T C A C T G G T C A C G A T C T G A C G T A C G T A A G T C C T A G G T A C
G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A

CDX1/MA0878.1/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CGATAAACGC
GCAATAAAA--
 A C G T A G T C A C T G G T C A C G A T C T G A C G T A C G T A A G T C C T A G G T A C
T C A G G A T C G T C A T C G A G C A T G C T A C G T A G C T A G T C A A C G T A C G T

PB0032.1_IRC900814_1/Jaspar

Match Rank:9
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----CGATAAACGC-
ATTTACGACAAATAGC
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G G T C A C G A T C T G A C G T A C G T A A G T C C T A G G T A C A C G T
C G T A C G A T G A C T A G C T G C T A A G T C A C T G C T G A T G A C C T G A C G T A G C T A G C A T C G T A C T A G A G T C

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CGATAAACGC
NGYCATAAAWCH
 A C G T A C G T A G T C A C T G G T C A C G A T C T G A C G T A C G T A A G T C C T A G G T A C
T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A