Information for 5-GGCGTGCCTGGCACTG (Motif 10)

A C T G A T C G A G T C A T C G A C G T A C T G A T G C G T A C A C G T A C T G A C T G A G T C C T G A A T G C C G A T A C T G
Reverse Opposite:
A G T C C G T A A T C G G A C T A C T G A G T C A G T C G T C A A C T G A T C G A G T C C G T A A T G C A C T G A T G C A G T C
p-value:1e-9
log p-value:-2.144e+01
Information Content per bp:1.875
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.57%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets31.5 +/- 20.1bp
Average Position of motif in Background32.5 +/- 8.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hic1/MA0739.1/Jaspar

Match Rank:1
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:GGCGTGCCTGGCACTG
-----GGTTGGCAT--
 A C T G A T C G A G T C A T C G A C G T A C T G A T G C G T A C A C G T A C T G A C T G A G T C C T G A A T G C C G A T A C T G
A C G T A C G T A C G T A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:2
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GGCGTGCCTGGCACTG
GGGGCTYGKCTGGGA---
 A C G T A C G T A C T G A T C G A G T C A T C G A C G T A C T G A T G C G T A C A C G T A C T G A C T G A G T C C T G A A T G C C G A T A C T G
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:GGCGTGCCTGGCACTG
----TGTCTGDCACCT
 A C T G A T C G A G T C A T C G A C G T A C T G A T G C G T A C A C G T A C T G A C T G A G T C C T G A A T G C C G A T A C T G
A C G T A C G T A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:4
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GGCGTGCCTGGCACTG
---CTGTCTGTCACCT
 A C T G A T C G A G T C A T C G A C G T A C T G A T G C G T A C A C G T A C T G A C T G A G T C C T G A A T G C C G A T A C T G
A C G T A C G T A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:GGCGTGCCTGGCACTG
------NTTGGCANN-
 A C T G A T C G A G T C A T C G A C G T A C T G A T G C G T A C A C G T A C T G A C T G A G T C C T G A A T G C C G A T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GGCGTGCCTGGCACTG-
-NGTAGGTTGGCATNNN
 A C T G A T C G A G T C A T C G A C G T A C T G A T G C G T A C A C G T A C T G A C T G A G T C C T G A A T G C C G A T A C T G A C G T
A C G T C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:GGCGTGCCTGGCACTG
------CTTGGCAA--
 A C T G A T C G A G T C A T C G A C G T A C T G A T G C G T A C A C G T A C T G A C T G A G T C C T G A A T G C C G A T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GGCGTGCCTGGCACTG
GGNGCGNCTGTTNNN-
 A C T G A T C G A G T C A T C G A C G T A C T G A T G C G T A C A C G T A C T G A C T G A G T C C T G A A T G C C G A T A C T G
C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.55
Offset:6
Orientation:forward strand
Alignment:GGCGTGCCTGGCACTG
------CCAGGAACAG
 A C T G A T C G A G T C A T C G A C G T A C T G A T G C G T A C A C G T A C T G A C T G A G T C C T G A A T G C C G A T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

HIC2/MA0738.1/Jaspar

Match Rank:10
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:GGCGTGCCTGGCACTG
-----NGTGGGCAT--
 A C T G A T C G A G T C A T C G A C G T A C T G A T G C G T A C A C G T A C T G A C T G A G T C C T G A A T G C C G A T A C T G
A C G T A C G T A C G T A C G T A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T