Information for 1-GCATGAACAC (Motif 1)

A C T G A G T C C G T A A C G T A C T G C G T A C G T A A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T C T A G A C G T A C G T A G T C C G T A A C G T A C T G A G T C
p-value:1e-10
log p-value:-2.421e+01
Information Content per bp:1.957
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.57%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets36.8 +/- 14.3bp
Average Position of motif in Background19.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0178.1_Sox8_2/Jaspar

Match Rank:1
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----GCATGAACAC
NNTNTCATGAATGT
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C T G C G T A C G T A A G T C C G T A A G T C
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GCATGAACAC
CCAGGAACAG
 A C T G A G T C C G T A A C G T A C T G C G T A C G T A A G T C C G T A A G T C
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GCATGAACAC--
--ATGAATATTC
 A C T G A G T C C G T A A C G T A C T G C G T A C G T A A G T C C G T A A G T C A C G T A C G T
A C G T A C G T G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:4
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GCATGAACAC--
--ATGMATATDC
 A C T G A G T C C G T A A C G T A C T G C G T A C G T A A G T C C G T A A G T C A C G T A C G T
A C G T A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C

FOXL1/MA0033.2/Jaspar

Match Rank:5
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GCATGAACAC
--GTAAACA-
 A C T G A G T C C G T A A C G T A C T G C G T A C G T A A G T C C G T A A G T C
A C G T A C G T C T A G G A C T T G C A G T C A T G C A A G T C G T C A A C G T

PB0170.1_Sox17_2/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GCATGAACAC----
NTTNTATGAATGTGNNC
 A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C T G C G T A C G T A A G T C C G T A A G T C A C G T A C G T A C G T A C G T
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

Foxj2/MA0614.1/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GCATGAACAC
--GTAAACAA
 A C T G A G T C C G T A A C G T A C T G C G T A C G T A A G T C C G T A A G T C
A C G T A C G T C T A G G C A T G T C A C G T A C G T A A G T C C G T A C G T A

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GCATGAACAC
-CATGAC---
 A C T G A G T C C G T A A C G T A C T G C G T A C G T A A G T C C G T A A G T C
A C G T T A G C T C G A A C G T C A T G C G T A A G T C A C G T A C G T A C G T

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GCATGAACAC
WWATRTAAACAN
 A C G T A C G T A C T G A G T C C G T A A C G T A C T G C G T A C G T A A G T C C G T A A G T C
G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A

NRF(NRF)/Promoter/Homer

Match Rank:10
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GCATGAACAC
GCGCATGCGCAC
 A C G T A C G T A C T G A G T C C G T A A C G T A C T G C G T A C G T A A G T C C G T A A G T C
A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C C T G A T A G C