Information for 9-CAGCTCCTGCACC (Motif 10)

A G T C C G T A A T C G A G T C C G A T A G T C T A G C C A G T A C T G A G T C C G T A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T A C T G A G T C G T C A A T C G C T A G C G T A A C T G A T G C A C G T A C T G
p-value:1e-6
log p-value:-1.433e+01
Information Content per bp:1.897
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif4.23%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets68.3 +/- 14.4bp
Average Position of motif in Background47.4 +/- 17.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CAGCTCCTGCACC
SNGCACCTGCHS-
 A G T C C G T A A T C G A G T C C G A T A G T C T A G C C A G T A C T G A G T C C G T A A G T C A G T C
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CAGCTCCTGCACC
-GGCTCYAKCAYC
 A G T C C G T A A T C G A G T C C G A T A G T C T A G C C A G T A C T G A G T C C G T A A G T C A G T C
A C G T C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:3
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CAGCTCCTGCACC
AGCAGCTGCTNN---
 A C G T A C G T A G T C C G T A A T C G A G T C C G A T A G T C T A G C C A G T A C T G A G T C C G T A A G T C A G T C
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CAGCTCCTGCACC
NCAGCTGCTG----
 A C G T A G T C C G T A A T C G A G T C C G A T A G T C T A G C C A G T A C T G A G T C C G T A A G T C A G T C
T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T A C G T A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CAGCTCCTGCACC--
CTCAGCAGCTGCTACTG
 A C G T A C G T A G T C C G T A A T C G A G T C C G A T A G T C T A G C C A G T A C T G A G T C C G T A A G T C A G T C A C G T A C G T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

TCF3/MA0522.2/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CAGCTCCTGCACC
-AACACCTGCT--
 A G T C C G T A A T C G A G T C C G A T A G T C T A G C C A G T A C T G A G T C C G T A A G T C A G T C
A C G T G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T A C G T A C G T

NRF1/MA0506.1/Jaspar

Match Rank:7
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CAGCTCCTGCACC
--GCGCCTGCGCA
 A G T C C G T A A T C G A G T C C G A T A G T C T A G C C A G T A C T G A G T C C G T A A G T C A G T C
A C G T A C G T T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A

POL011.1_XCPE1/Jaspar

Match Rank:8
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CAGCTCCTGCACC
--GGTCCCGCCC-
 A G T C C G T A A T C G A G T C C G A T A G T C T A G C C A G T A C T G A G T C C G T A A G T C A G T C
A C G T A C G T A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C A C G T

SCRT2/MA0744.1/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CAGCTCCTGCACC
CCACCTGTTGCAT-
 A C G T A G T C C G T A A T C G A G T C C G A T A G T C T A G C C A G T A C T G A G T C C G T A A G T C A G T C
T A G C G T A C C G T A A T G C A G T C A C G T C A T G A C G T A C G T A C T G T G A C C G T A A G C T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CAGCTCCTGCACC
AGCAGCTGCT-----
 A C G T A C G T A G T C C G T A A T C G A G T C C G A T A G T C T A G C C A G T A C T G A G T C C G T A A G T C A G T C
T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T