Information for 6-GSVGTSTGAGGTC (Motif 7)

A C T G T A G C T G C A A C T G C G A T A T C G A C G T T A C G C T G A T A C G A C T G G C A T T G A C
Reverse Opposite:
A C T G C G T A T G A C A T G C G A C T A T G C T G C A A T G C G C T A G T A C A C G T A T C G A G T C
p-value:1e-11
log p-value:-2.624e+01
Information Content per bp:1.597
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets62.9 +/- 22.7bp
Average Position of motif in Background50.3 +/- 22.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR2C2/MA0504.1/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GSVGTSTGAGGTC-
AGGGGTCAGAGGTCA
 A C G T A C T G T A G C T G C A A C T G C G A T A T C G A C G T T A C G C T G A T A C G A C T G G C A T T G A C A C G T
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:2
Score:0.60
Offset:6
Orientation:forward strand
Alignment:GSVGTSTGAGGTC-
------TRAGGTCA
 A C T G T A G C T G C A A C T G C G A T A T C G A C G T T A C G C T G A T A C G A C T G G C A T T G A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A

CREB1/MA0018.2/Jaspar

Match Rank:3
Score:0.59
Offset:6
Orientation:forward strand
Alignment:GSVGTSTGAGGTC-
------TGACGTCA
 A C T G T A G C T G C A A C T G C G A T A T C G A C G T T A C G C T G A T A C G A C T G G C A T T G A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G C G T A A T G C C T A G A G C T G T A C C G T A

MGA/MA0801.1/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GSVGTSTGAGGTC
-AGGTGTGA----
 A C T G T A G C T G C A A C T G C G A T A T C G A C G T T A C G C T G A T A C G A C T G G C A T T G A C
A C G T C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A A C G T A C G T A C G T A C G T

TBX1/MA0805.1/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GSVGTSTGAGGTC
-AGGTGTGA----
 A C T G T A G C T G C A A C T G C G A T A T C G A C G T T A C G C T G A T A C G A C T G G C A T T G A C
A C G T C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A A C G T A C G T A C G T A C G T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GSVGTSTGAGGTC-
GAGGTCAAAGGTCA
 A C T G T A G C T G C A A C T G C G A T A T C G A C G T T A C G C T G A T A C G A C T G G C A T T G A C A C G T
T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:7
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GSVGTSTGAGGTC--
---NNHTGTGGTTWN
 A C T G T A G C T G C A A C T G C G A T A T C G A C G T T A C G C T G A T A C G A C T G G C A T T G A C A C G T A C G T
A C G T A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GSVGTSTGAGGTC-
GGTCANYTGAGGWCA
 A C G T A C T G T A G C T G C A A C T G C G A T A T C G A C G T T A C G C T G A T A C G A C T G G C A T T G A C A C G T
C T A G C A T G A C G T A G T C G C T A A G C T A G T C A G C T T C A G C T G A A C T G C A T G G C A T A T G C C G T A

RUNX1/MA0002.2/Jaspar

Match Rank:9
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GSVGTSTGAGGTC-
---GTCTGTGGTTT
 A C T G T A G C T G C A A C T G C G A T A T C G A C G T T A C G C T G A T A C G A C T G G C A T T G A C A C G T
A C G T A C G T A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:10
Score:0.57
Offset:6
Orientation:forward strand
Alignment:GSVGTSTGAGGTC
------TGACGT-
 A C T G T A G C T G C A A C T G C G A T A T C G A C G T T A C G C T G A T A C G A C T G G C A T T G A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G C G T A A G T C A C T G G A C T A C G T