Information for 4-CGAGCCGCGACAC (Motif 5)

A G T C A C T G C T G A A C T G A G T C A G T C A C T G A G T C A T C G C G T A A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G A C G T A T G C A C T G A G T C A C T G A C T G G T A C G A C T G T A C A C T G
p-value:1e-13
log p-value:-3.039e+01
Information Content per bp:1.913
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.7 +/- 23.6bp
Average Position of motif in Background31.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0117.1_Eomes_2/Jaspar

Match Rank:1
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CGAGCCGCGACAC------
---NNGGCGACACCTCNNN
 A G T C A C T G C T G A A C T G A G T C A G T C A C T G A G T C A T C G C G T A A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C

PB0164.1_Smad3_2/Jaspar

Match Rank:2
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CGAGCCGCGACAC--
TACGCCCCGCCACTCTG
 A C G T A C G T A G T C A C T G C T G A A C T G A G T C A G T C A C T G A G T C A T C G C G T A A G T C C G T A A G T C A C G T A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.54
Offset:6
Orientation:forward strand
Alignment:CGAGCCGCGACAC---
------GCCACACCCA
 A G T C A C T G C T G A A C T G A G T C A G T C A C T G A G T C A T C G C G T A A G T C C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A

ZBED1/MA0749.1/Jaspar

Match Rank:4
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CGAGCCGCGACAC-
-CTATCGCGACATA
 A G T C A C T G C T G A A C T G A G T C A G T C A C T G A G T C A T C G C G T A A G T C C G T A A G T C A C G T
A C G T G T A C C G A T T C G A G A C T A G T C T C A G G A T C T A C G T C G A G A T C G C T A A C G T C T G A

PB0153.1_Nr2f2_2/Jaspar

Match Rank:5
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CGAGCCGCGACAC---
CGCGCCGGGTCACGTA
 A G T C A C T G C T G A A C T G A G T C A G T C A C T G A G T C A T C G C G T A A G T C C G T A A G T C A C G T A C G T A C G T
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

CREB3/MA0638.1/Jaspar

Match Rank:6
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CGAGCCGCGACAC--
-GTGCCACGTCATCA
 A G T C A C T G C T G A A C T G A G T C A G T C A C T G A G T C A T C G C G T A A G T C C G T A A G T C A C G T A C G T
A C G T T C A G A G C T C A T G G T A C A T G C C G T A A G T C C T A G G A C T T G A C C T G A A G C T G T A C T C G A

PB0199.1_Zfp161_2/Jaspar

Match Rank:7
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---CGAGCCGCGACAC
NNGCNCTGCGCGGC--
 A C G T A C G T A C G T A G T C A C T G C T G A A C T G A G T C A G T C A C T G A G T C A T C G C G T A A G T C C G T A A G T C
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C A C G T A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:8
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:CGAGCCGCGACAC----
-----GGCCACACCCAN
 A G T C A C T G C T G A A C T G A G T C A G T C A C T G A G T C A T C G C G T A A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G

Klf1/MA0493.1/Jaspar

Match Rank:9
Score:0.49
Offset:5
Orientation:forward strand
Alignment:CGAGCCGCGACAC---
-----GGCCACACCCA
 A G T C A C T G C T G A A C T G A G T C A G T C A C T G A G T C A T C G C G T A A G T C C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T C A G T G A C G A T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A

Pax2/MA0067.1/Jaspar

Match Rank:10
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:CGAGCCGCGACAC
----NCGTGACN-
 A G T C A C T G C T G A A C T G A G T C A G T C A C T G A G T C A T C G C G T A A G T C C G T A A G T C
A C G T A C G T A C G T A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T