Information for 15-TTGCATGTGC (Motif 24)

A C G T A C G T A C T G A G T C C G T A A C G T A C T G A C G T A C T G G T A C
Reverse Opposite:
A C T G A G T C C G T A G T A C C G T A A C G T C T A G A G T C C G T A C G T A
p-value:1e-6
log p-value:-1.399e+01
Information Content per bp:1.923
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif16.6
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets68.4 +/- 20.2bp
Average Position of motif in Background53.1 +/- 21.3bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU2F2/MA0507.1/Jaspar

Match Rank:1
Score:0.71
Offset:-5
Orientation:forward strand
Alignment:-----TTGCATGTGC
TTCATTTGCATAT--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C T G A C G T A C T G G T A C
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T A C G T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--TTGCATGTGC
ATTTGCATAT--
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C T G A C G T A C T G G T A C
G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T A C G T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TTGCATGTGC
ATTTGCATAA--
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C T G A C G T A C T G G T A C
C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A A C G T A C G T

Myc/MA0147.2/Jaspar

Match Rank:4
Score:0.66
Offset:2
Orientation:forward strand
Alignment:TTGCATGTGC--
--CCATGTGCTT
 A C G T A C G T A C T G A G T C C G T A A C G T A C T G A C G T A C T G G T A C A C G T A C G T
A C G T A C G T T G A C A G T C C G T A A G C T A C T G A C G T A C T G A T G C G A C T A G C T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:5
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----TTGCATGTGC
GGGATTGCATNN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C T G A C G T A C T G G T A C
T C A G A T C G A C T G C T G A A C G T A C G T C A T G G T A C C T G A A G C T A G T C A G C T A C G T A C G T

bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.65
Offset:2
Orientation:forward strand
Alignment:TTGCATGTGC--
--KCACGTGMCN
 A C G T A C G T A C T G A G T C C G T A A C G T A C T G A C G T A C T G G T A C A C G T A C G T
A C G T A C G T C A T G G T A C C G T A A G T C C T A G A C G T A C T G G T A C A G T C A G C T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TTGCATGTGC--
SDGCAGGTGCNS
 A C G T A C G T A C T G A G T C C G T A A C G T A C T G A C G T A C T G G T A C A C G T A C G T
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:8
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TTGCATGTGC
ATGMATATDC
 A C G T A C G T A C T G A G T C C G T A A C G T A C T G A C G T A C T G G T A C
G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C

HES7/MA0822.1/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TTGCATGTGC--
TGGCACGTGCCA
 A C G T A C G T A C T G A G T C C G T A A C G T A C T G A C G T A C T G G T A C A C G T A C G T
G A C T T A C G C T A G A G T C C G T A A G T C A C T G A G C T C T A G A G T C A G T C C T G A

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:10
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TTGCATGTGC-
-KCCACGTGAC
 A C G T A C G T A C T G A G T C C G T A A C G T A C T G A C G T A C T G G T A C A C G T
A C G T A C T G T G A C G T A C C G T A A G T C T A C G A C G T A C T G G T C A A G T C