Information for 13-AACTCCACTC (Motif 22)

G T C A T G C A G T A C C A G T A G T C A G T C C G T A A T G C A C G T A G T C
Reverse Opposite:
A C T G T G C A A T C G C G A T A C T G A C T G G T C A A C T G A C G T A C G T
p-value:1e-7
log p-value:-1.675e+01
Information Content per bp:1.843
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.80%
Number of Background Sequences with motif149.9
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets52.6 +/- 24.4bp
Average Position of motif in Background52.9 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.19
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF354C/MA0130.1/Jaspar

Match Rank:1
Score:0.75
Offset:2
Orientation:forward strand
Alignment:AACTCCACTC
--ATCCAC--
 G T C A T G C A G T A C C A G T A G T C A G T C C G T A A T G C A C G T A G T C
A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:2
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:AACTCCACTC--
--MRSCACTYAA
 G T C A T G C A G T A C C A G T A G T C A G T C C G T A A T G C A C G T A G T C A C G T A C G T
A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:3
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:AACTCCACTC---
---NSCACTYVAV
 G T C A T G C A G T A C C A G T A G T C A G T C C G T A A T G C A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:4
Score:0.66
Offset:2
Orientation:forward strand
Alignment:AACTCCACTC---
--AGCCACTCAAG
 G T C A T G C A G T A C C A G T A G T C A G T C C G T A A T G C A C G T A G T C A C G T A C G T A C G T
A C G T A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

PB0114.1_Egr1_2/Jaspar

Match Rank:5
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--AACTCCACTC----
NNAGTCCCACTCNNNN
 A C G T A C G T G T C A T G C A G T A C C A G T A G T C A G T C C G T A A T G C A C G T A G T C A C G T A C G T A C G T A C G T
T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.65
Offset:2
Orientation:forward strand
Alignment:AACTCCACTC--
--AASCACTCAA
 G T C A T G C A G T A C C A G T A G T C A G T C C G T A A T G C A C G T A G T C A C G T A C G T
A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A

PB0134.1_Hnf4a_2/Jaspar

Match Rank:7
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----AACTCCACTC-
GGCAAAAGTCCAATAA
 A C G T A C G T A C G T A C G T A C G T G T C A T G C A G T A C C A G T A G T C A G T C C G T A A T G C A C G T A G T C A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:8
Score:0.63
Offset:3
Orientation:forward strand
Alignment:AACTCCACTC---
---RSCACTYRAG
 G T C A T G C A G T A C C A G T A G T C A G T C C G T A A T G C A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G

NKX2-8/MA0673.1/Jaspar

Match Rank:9
Score:0.60
Offset:4
Orientation:forward strand
Alignment:AACTCCACTC---
----CCACTTGAA
 G T C A T G C A G T A C C A G T A G T C A G T C C G T A A T G C A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AACTCCACTC-
SSAATCCACANN
 A C G T G T C A T G C A G T A C C A G T A G T C A G T C C G T A A T G C A C G T A G T C A C G T
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C