Information for 9-CGGCCATCTT (Motif 17)

G T A C A T C G T C A G A G T C A G T C C T G A G C A T A T G C A C G T C G A T
Reverse Opposite:
C G T A C G T A A T C G C G T A A G C T A C T G A C T G A G T C T A G C A C T G
p-value:1e-8
log p-value:-2.042e+01
Information Content per bp:1.841
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.36%
Number of Background Sequences with motif208.3
Percentage of Background Sequences with motif0.45%
Average Position of motif in Targets51.3 +/- 28.3bp
Average Position of motif in Background46.1 +/- 32.4bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.88
Offset:-1
Orientation:reverse strand
Alignment:-CGGCCATCTT-
GCNGCCATCTTG
 A C G T G T A C A T C G T C A G A G T C A G T C C T G A G C A T A T G C A C G T C G A T A C G T
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.86
Offset:-1
Orientation:reverse strand
Alignment:-CGGCCATCTT-
GCCGCCATCTTG
 A C G T G T A C A T C G T C A G A G T C A G T C C T G A G C A T A T G C A C G T C G A T A C G T
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:3
Score:0.70
Offset:2
Orientation:forward strand
Alignment:CGGCCATCTT--
--GCCATCTGTT
 G T A C A T C G T C A G A G T C A G T C C T G A G C A T A T G C A C G T C G A T A C G T A C G T
A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:4
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CGGCCATCTT-----
CCNNACCATCTGGCCTN
 A C G T A C G T G T A C A T C G T C A G A G T C A G T C C T G A G C A T A T G C A C G T C G A T A C G T A C G T A C G T A C G T A C G T
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

YY2/MA0748.1/Jaspar

Match Rank:5
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CGGCCATCTT
GTCCGCCATTA-
 A C G T A C G T G T A C A T C G T C A G A G T C A G T C C T G A G C A T A T G C A C G T C G A T
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:6
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CGGCCATCTT--
--ACCATCTGTT
 G T A C A T C G T C A G A G T C A G T C C T G A G C A T A T G C A C G T C G A T A C G T A C G T
A C G T A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T

TAL1::TCF3/MA0091.1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CGGCCATCTT--
CGACCATCTGTT
 G T A C A T C G T C A G A G T C A G T C C T G A G C A T A T G C A C G T C G A T A C G T A C G T
G T A C T A C G C T G A G T A C A T G C C G T A A C G T G T A C A C G T A C T G A C G T G A C T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:8
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CGGCCATCTT--
--RCCATMTGTT
 G T A C A T C G T C A G A G T C A G T C C T G A G C A T A T G C A C G T C G A T A C G T A C G T
A C G T A C G T C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:9
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CGGCCATCTT----
--GCCAGCTGBTNB
 G T A C A T C G T C A G A G T C A G T C C T G A G C A T A T G C A C G T C G A T A C G T A C G T A C G T A C G T
A C G T A C G T T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C

PB0164.1_Smad3_2/Jaspar

Match Rank:10
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------CGGCCATCTT-
TACGCCCCGCCACTCTG
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C A T C G T C A G A G T C A G T C C T G A G C A T A T G C A C G T C G A T A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G