Information for 10-CGTCAGCCCTGCG (Motif 14)

A G T C A T C G A C G T G T A C C G T A A C T G A G T C A G T C A G T C A G C T A C T G A G T C A T C G
Reverse Opposite:
A T G C A C T G A G T C C T G A A C T G A C T G C T A G G T A C C G A T A C T G C G T A A T G C A C T G
p-value:1e-9
log p-value:-2.212e+01
Information Content per bp:1.844
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets29.7 +/- 22.5bp
Average Position of motif in Background45.3 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0164.1_Smad3_2/Jaspar

Match Rank:1
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CGTCAGCCCTGCG------
--TACGCCCCGCCACTCTG
 A G T C A T C G A C G T G T A C C G T A A C T G A G T C A G T C A G T C A G C T A C T G A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CGTCAGCCCTGCG-
----TGCCCAGNHW
 A G T C A T C G A C G T G T A C C G T A A C T G A G T C A G T C A G T C A G C T A C T G A G T C A T C G A C G T
A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

POL003.1_GC-box/Jaspar

Match Rank:3
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CGTCAGCCCTGCG----
---NAGCCCCGCCCCCN
 A G T C A T C G A C G T G T A C C G T A A C T G A G T C A G T C A G T C A G C T A C T G A G T C A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

Sp1(Zf)/Promoter/Homer

Match Rank:4
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CGTCAGCCCTGCG---
----GGCCCCGCCCCC
 A G T C A T C G A C G T G T A C C G T A A C T G A G T C A G T C A G T C A G C T A C T G A G T C A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

Atf3/MA0605.1/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CGTCAGCCCTGCG
ACGTCATC------
 A C G T A G T C A T C G A C G T G T A C C G T A A C T G A G T C A G T C A G T C A G C T A C T G A G T C A T C G
C T G A G A T C A C T G A C G T G T A C C G T A A G C T A T G C A C G T A C G T A C G T A C G T A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CGTCAGCCCTGCG
TGACCTTTGCCCTA--
 A C G T A C G T A C G T A G T C A T C G A C G T G T A C C G T A A C T G A G T C A G T C A G T C A G C T A C T G A G T C A T C G
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A A C G T A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:7
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CGTCAGCCCTGCG----
---NNGCNCTGCGCGGC
 A G T C A T C G A C G T G T A C C G T A A C T G A G T C A G T C A G T C A G C T A C T G A G T C A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C

PB0124.1_Gabpa_2/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CGTCAGCCCTGCG--
CCGTCTTCCCCCTCAC
 A C G T A G T C A T C G A C G T G T A C C G T A A C T G A G T C A G T C A G T C A G C T A C T G A G T C A T C G A C G T A C G T
T G A C A G T C C A T G A C G T G A T C G C A T G A C T G A T C A G T C A T G C G T A C G A T C A G C T T A G C T G C A G A T C

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:9
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CGTCAGCCCTGCG
--TAATCCCN---
 A G T C A T C G A C G T G T A C C G T A A C T G A G T C A G T C A G T C A G C T A C T G A G T C A T C G
A C G T A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G A C G T A C G T A C G T

PITX3/MA0714.1/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CGTCAGCCCTGCG
CTTAATCCC----
 A G T C A T C G A C G T G T A C C G T A A C T G A G T C A G T C A G T C A G C T A C T G A G T C A T C G
T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C A C G T A C G T A C G T A C G T