Information for 9-KGRCSGGCKGGTT (Motif 13)

A C G T A C T G C T G A A G T C A T C G A C T G A C T G A G T C C A G T A C T G A C T G A C G T A C G T
Reverse Opposite:
C G T A C G T A A G T C A G T C G T C A A C T G A G T C A G T C T A G C A C T G A G C T A G T C G T C A
p-value:1e-9
log p-value:-2.212e+01
Information Content per bp:1.874
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.7 +/- 24.4bp
Average Position of motif in Background72.5 +/- 3.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0164.1_Smad3_2/Jaspar

Match Rank:1
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-KGRCSGGCKGGTT---
NAGANTGGCGGGGNGNA
 A C G T A C G T A C T G C T G A A G T C A T C G A C T G A C T G A G T C C A G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

POL006.1_BREu/Jaspar

Match Rank:2
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:KGRCSGGCKGGTT
-----GGCGCGCT
 A C G T A C T G C T G A A G T C A T C G A C T G A C T G A G T C C A G T A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:3
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:KGRCSGGCKGGTT--
GGNGCGNCTGTTNNN
 A C G T A C T G C T G A A G T C A T C G A C T G A C T G A G T C C A G T A C T G A C T G A C G T A C G T A C G T A C G T
C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

PB0039.1_Klf7_1/Jaspar

Match Rank:4
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:KGRCSGGCKGGTT---
NNAGGGGCGGGGTNNA
 A C G T A C T G C T G A A G T C A T C G A C T G A C T G A G T C C A G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
G C T A C G A T C T G A C T A G C T A G A C T G A C T G G A T C C A T G A C T G C A T G C A T G A G C T G A T C T C A G C G T A

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:KGRCSGGCKGGTT---
----SDGCAGGTGCNS
 A C G T A C T G C T G A A G T C A T C G A C T G A C T G A G T C C A G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

SP2/MA0516.1/Jaspar

Match Rank:6
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--KGRCSGGCKGGTT
GGGNGGGGGCGGGGC
 A C G T A C G T A C G T A C T G C T G A A G T C A T C G A C T G A C T G A G T C C A G T A C T G A C T G A C G T A C G T
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C

GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer

Match Rank:7
Score:0.52
Offset:-6
Orientation:reverse strand
Alignment:------KGRCSGGCKGGTT-
VAAACYKGTHWAACMRGTTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T G A A G T C A T C G A C T G A C T G A G T C C A G T A C T G A C T G A C G T A C G T A C G T
T C G A C T G A C T G A C G T A T A G C G A C T C A T G T C A G G C A T G C A T C G T A C T G A C T G A A G T C G T A C C T A G A T C G G A C T G A C T A G C T

THAP1/MA0597.1/Jaspar

Match Rank:8
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:KGRCSGGCKGGTT
-TNNGGGCAG---
 A C G T A C T G C T G A A G T C A T C G A C T G A C T G A G T C C A G T A C T G A C T G A C G T A C G T
A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.51
Offset:3
Orientation:forward strand
Alignment:KGRCSGGCKGGTT
---CTGTCTGG--
 A C G T A C T G C T G A A G T C A T C G A C T G A C T G A G T C C A G T A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:10
Score:0.50
Offset:1
Orientation:forward strand
Alignment:KGRCSGGCKGGTT--
-AGGGGGCGGGGCTG
 A C G T A C T G C T G A A G T C A T C G A C T G A C T G A G T C C A G T A C T G A C T G A C G T A C G T A C G T A C G T
A C G T C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G