Information for 1-YGATTGGCYG (Motif 1)

A G C T T A C G T C G A A G C T A C G T A C T G A C T G G A T C G A T C T A C G
Reverse Opposite:
A T G C C T A G C T A G A G T C A G T C C G T A T C G A A G C T A T G C T C G A
p-value:1e-24
log p-value:-5.560e+01
Information Content per bp:1.673
Number of Target Sequences with motif72.0
Percentage of Target Sequences with motif8.10%
Number of Background Sequences with motif861.2
Percentage of Background Sequences with motif1.84%
Average Position of motif in Targets52.6 +/- 26.5bp
Average Position of motif in Background48.5 +/- 31.5bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL004.1_CCAAT-box/Jaspar

Match Rank:1
Score:0.93
Offset:0
Orientation:reverse strand
Alignment:YGATTGGCYG--
TGATTGGCTANN
 A G C T T A C G T C G A A G C T A C G T A C T G A C T G G A T C G A T C T A C G A C G T A C G T
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

NFY(CCAAT)/Promoter/Homer

Match Rank:2
Score:0.92
Offset:-1
Orientation:reverse strand
Alignment:-YGATTGGCYG
CCGATTGGCT-
 A C G T A G C T T A C G T C G A A G C T A C G T A C T G A C T G G A T C G A T C T A C G
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T

NFYB/MA0502.1/Jaspar

Match Rank:3
Score:0.90
Offset:-1
Orientation:reverse strand
Alignment:-YGATTGGCYG----
CTGATTGGTCNATTT
 A C G T A G C T T A C G T C G A A G C T A C G T A C T G A C T G G A T C G A T C T A C G A C G T A C G T A C G T A C G T
A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

NFYA/MA0060.2/Jaspar

Match Rank:4
Score:0.83
Offset:-7
Orientation:forward strand
Alignment:-------YGATTGGCYG-
AGAGTGCTGATTGGTCCA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T T A C G T C G A A G C T A C G T A C T G A C T G G A T C G A T C T A C G A C G T
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.80
Offset:3
Orientation:forward strand
Alignment:YGATTGGCYG
---TTGGCA-
 A G C T T A C G T C G A A G C T A C G T A C T G A C T G G A T C G A T C T A C G
A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T

Dux/MA0611.1/Jaspar

Match Rank:6
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-YGATTGGCYG
TTGATTGN---
 A C G T A G C T T A C G T C G A A G C T A C G T A C T G A C T G G A T C G A T C T A C G
G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:7
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:YGATTGGCYG-
--NTTGGCANN
 A G C T T A C G T C G A A G C T A C G T A C T G A C T G G A T C G A T C T A C G A C G T
A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

PH0026.1_Duxbl/Jaspar

Match Rank:8
Score:0.72
Offset:-6
Orientation:reverse strand
Alignment:------YGATTGGCYG-
NNNNGTTGATTGGGTCG
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T T A C G T C G A A G C T A C G T A C T G A C T G G A T C G A T C T A C G A C G T
A T G C C G T A A G T C A G T C T C A G G A C T C G A T C T A G C T G A A C G T A C G T C T A G T C A G T C A G G A C T G A T C T C A G

Gfi1/MA0038.1/Jaspar

Match Rank:9
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---YGATTGGCYG
CNGTGATTTN---
 A C G T A C G T A C G T A G C T T A C G T C G A A G C T A C G T A C T G A C T G G A T C G A T C T A C G
A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:10
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:YGATTGGCYG-
-NNTTGGCANN
 A G C T T A C G T C G A A G C T A C G T A C T G A C T G G A T C G A T C T A C G A C G T
A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C