Information for 5-CTCATCATTCTCT (Motif 7)

A G T C C G A T T G A C C G T A C G A T A G T C C G T A C A G T A C G T A G T C C G A T G T A C C A G T
Reverse Opposite:
G C T A A C T G C G T A A C T G T G C A G T C A C G A T C T A G C G T A A C G T A C T G C G T A C T A G
p-value:1e-9
log p-value:-2.256e+01
Information Content per bp:1.839
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.17%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.5 +/- 7.8bp
Average Position of motif in Background24.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0152.1_Pou6f1_2/Jaspar

Match Rank:1
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----CTCATCATTCTCT
GCAACCTCATTATNNNN-
 A C G T A C G T A C G T A C G T A C G T A G T C C G A T T G A C C G T A C G A T A G T C C G T A C A G T A C G T A G T C C G A T G T A C C A G T
C A T G G T A C G T C A C G T A A T G C G T A C A C G T G T A C C G T A A C G T C G A T C G T A C G A T A T C G C G A T C A G T A G C T A C G T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:2
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----CTCATCATTCTCT
NNNACCTCATTATCNTN-
 A C G T A C G T A C G T A C G T A C G T A G T C C G A T T G A C C G T A C G A T A G T C C G T A C A G T A C G T A G T C C G A T G T A C C A G T
C A T G G A T C G T C A C G T A T A C G G T A C A C G T G T A C C G T A C G A T C G A T C G T A C G A T A T G C A C T G C G A T A G T C A C G T

POU6F2/MA0793.1/Jaspar

Match Rank:3
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CTCATCATTCTCT
AGCTCATTAT-----
 A C G T A C G T A G T C C G A T T G A C C G T A C G A T A G T C C G T A C A G T A C G T A G T C C G A T G T A C C A G T
C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T A C G T A C G T A C G T A C G T A C G T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:4
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CTCATCATTCTCT
-TCATCAATCA--
 A G T C C G A T T G A C C G T A C G A T A G T C C G T A C A G T A C G T A G T C C G A T G T A C C A G T
A C G T G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A A C G T A C G T

Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CTCATCATTCTCT
NCTAATTA------
 A C G T A G T C C G A T T G A C C G T A C G A T A G T C C G T A C A G T A C G T A G T C C G A T G T A C C A G T
T A C G A G T C A G C T G T C A C G T A A C G T A C G T C T G A A C G T A C G T A C G T A C G T A C G T A C G T

MEOX2/MA0706.1/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CTCATCATTCTCT
AGTAATTAAC----
 A C G T A G T C C G A T T G A C C G T A C G A T A G T C C G T A C A G T A C G T A G T C C G A T G T A C C A G T
C T G A T A C G G A C T T G C A G T C A C A G T A G C T C T G A C G T A T G A C A C G T A C G T A C G T A C G T

MEOX1/MA0661.1/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CTCATCATTCTCT
GCTAATTAAC----
 A C G T A G T C C G A T T G A C C G T A C G A T A G T C C G T A C A G T A C G T A G T C C G A T G T A C C A G T
T C A G T A G C G A C T T G C A C G T A G A C T A C G T C T G A G T C A T A G C A C G T A C G T A C G T A C G T

MF0010.1_Homeobox_class/Jaspar

Match Rank:8
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CTCATCATTCTCT
--AATTATT----
 A G T C C G A T T G A C C G T A C G A T A G T C C G T A C A G T A C G T A G T C C G A T G T A C C A G T
A C G T A C G T G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T A C G T A C G T A C G T

VAX1/MA0722.1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CTCATCATTCTCT
CTAATTAC-----
 A G T C C G A T T G A C C G T A C G A T A G T C C G T A C A G T A C G T A G T C C G A T G T A C C A G T
A G T C G A C T G T C A G T C A C G A T C A G T C T G A G A T C A C G T A C G T A C G T A C G T A C G T

VAX2/MA0723.1/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CTCATCATTCTCT
CTAATTAC-----
 A G T C C G A T T G A C C G T A C G A T A G T C C G T A C A G T A C G T A G T C C G A T G T A C C A G T
A G T C G A C T G T C A G C T A C G A T C A G T C T G A A G T C A C G T A C G T A C G T A C G T A C G T