Information for 4-GGTGGTTGGCCKYGCC (Motif 5)

C T A G A C T G A G C T A T C G A T C G A G C T A C G T A C T G A C T G G T A C A G T C C A G T G A T C A T C G A G T C A G T C
Reverse Opposite:
A C T G C T A G A T G C C T A G G T C A T A C G A C T G A G T C A G T C C G T A C T G A A T G C A T G C C T G A G T A C A G T C
p-value:1e-13
log p-value:-3.151e+01
Information Content per bp:1.755
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.76%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets63.7 +/- 25.4bp
Average Position of motif in Background77.5 +/- 11.9bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.1/Jaspar

Match Rank:1
Score:0.61
Offset:5
Orientation:forward strand
Alignment:GGTGGTTGGCCKYGCC
-----TTGGCA-----
 C T A G A C T G A G C T A T C G A T C G A G C T A C G T A C T G A C T G G T A C A G T C C A G T G A T C A T C G A G T C A G T C
A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GGTGGTTGGCCKYGCC
NGTAGGTTGGCATNNN-
 A C G T C T A G A C T G A G C T A T C G A T C G A G C T A C G T A C T G A C T G G T A C A G T C C A G T G A T C A T C G A G T C A G T C
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GGTGGTTGGCCKYGCC
--TGATTGGCTANN--
 C T A G A C T G A G C T A T C G A T C G A G C T A C G T A C T G A C T G G T A C A G T C C A G T G A T C A T C G A G T C A G T C
A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:GGTGGTTGGCCKYGCC
----NTTGGCANN---
 C T A G A C T G A G C T A T C G A T C G A G C T A C G T A C T G A C T G G T A C A G T C C A G T G A T C A T C G A G T C A G T C
A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:5
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GGTGGTTGGCCKYGCC
---GGTTGGCAT----
 C T A G A C T G A G C T A T C G A T C G A G C T A C G T A C T G A C T G G T A C A G T C C A G T G A T C A T C G A G T C A G T C
A C G T A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T A C G T

ZBTB7C/MA0695.1/Jaspar

Match Rank:6
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---GGTGGTTGGCCKYGCC
NTCGGTGGTCGC-------
 A C G T A C G T A C G T C T A G A C T G A G C T A T C G A T C G A G C T A C G T A C T G A C T G G T A C A G T C C A G T G A T C A T C G A G T C A G T C
A C G T C A G T A G T C C A T G C A T G C A G T T C A G A C T G C A G T G A T C A T C G G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZBTB7A/MA0750.1/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GGTGGTTGGCCKYGCC
TCGGTGGTCGCN------
 A C G T A C G T C T A G A C T G A G C T A T C G A T C G A G C T A C G T A C T G A C T G G T A C A G T C C A G T G A T C A T C G A G T C A G T C
A C G T G T A C C A T G A C T G C A G T T A C G C T A G C A G T A G T C A T C G A G T C T G A C A C G T A C G T A C G T A C G T A C G T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:8
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GGTGGTTGGCCKYGCC
-CCGATTGGCT-----
 C T A G A C T G A G C T A T C G A T C G A G C T A C G T A C T G A C T G G T A C A G T C C A G T G A T C A T C G A G T C A G T C
A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T A C G T A C G T A C G T

PB0150.1_Mybl1_2/Jaspar

Match Rank:9
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---GGTGGTTGGCCKYGCC
CACGGCAGTTGGTNN----
 A C G T A C G T A C G T C T A G A C T G A G C T A T C G A T C G A G C T A C G T A C T G A C T G G T A C A G T C C A G T G A T C A T C G A G T C A G T C
T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G A C G T A C G T A C G T A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GGTGGTTGGCCKYGCC
CGTGGGTGGTCC----
 C T A G A C T G A G C T A T C G A T C G A G C T A C G T A C T G A C T G G T A C A G T C C A G T G A T C A T C G A G T C A G T C
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C A C G T A C G T A C G T A C G T