Information for 7-TCWTYGGCTG (Motif 4)

A C G T A T G C C G T A C G A T G A C T A C T G A C T G G T A C A C G T A C T G
Reverse Opposite:
A G T C G T C A C A T G G T A C T G A C C T G A G C T A G C A T T A C G G T C A
p-value:1e-15
log p-value:-3.482e+01
Information Content per bp:1.690
Number of Target Sequences with motif56.0
Percentage of Target Sequences with motif16.42%
Number of Background Sequences with motif2043.2
Percentage of Background Sequences with motif4.74%
Average Position of motif in Targets55.5 +/- 24.9bp
Average Position of motif in Background50.9 +/- 34.1bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL004.1_CCAAT-box/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TCWTYGGCTG--
TGATTGGCTANN
 A C G T A T G C C G T A C G A T G A C T A C T G A C T G G T A C A C G T A C T G A C G T A C G T
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.64
Offset:6
Orientation:forward strand
Alignment:TCWTYGGCTG--
------GCTGTG
 A C G T A T G C C G T A C G A T G A C T A C T G A C T G G T A C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:TCWTYGGCTG
-----NGCTN
 A C G T A T G C C G T A C G A T G A C T A C T G A C T G G T A C A C G T A C T G
A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.61
Offset:3
Orientation:forward strand
Alignment:TCWTYGGCTG-
---TWGTCTGV
 A C G T A T G C C G T A C G A T G A C T A C T G A C T G G T A C A C G T A C T G A C G T
A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TCWTYGGCTG-
-CAGCAGCTGN
 A C G T A T G C C G T A C G A T G A C T A C T G A C T G G T A C A C G T A C T G A C G T
A C G T T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T

NRL/MA0842.1/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TCWTYGGCTG--
-AATTTGCTGAC
 A C G T A T G C C G T A C G A T G A C T A C T G A C T G G T A C A C G T A C T G A C G T A C G T
A C G T C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C

NFY(CCAAT)/Promoter/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TCWTYGGCTG
CCGATTGGCT-
 A C G T A C G T A T G C C G T A C G A T G A C T A C T G A C T G G T A C A C G T A C T G
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TCWTYGGCTG-----
TCNCCTGCTGNGNNN
 A C G T A T G C C G T A C G A T G A C T A C T G A C T G G T A C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TCWTYGGCTG-
-NAHCAGCTGD
 A C G T A T G C C G T A C G A T G A C T A C T G A C T G G T A C A C G T A C T G A C G T
A C G T G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T

NFYB/MA0502.1/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TCWTYGGCTG----
CTGATTGGTCNATTT
 A C G T A C G T A T G C C G T A C G A T G A C T A C T G A C T G G T A C A C G T A C T G A C G T A C G T A C G T A C G T
A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T