Information for 3-KGSCHGYCAATCA (Motif 3)

C A G T T C A G T A C G T G A C G T C A A C T G A G T C T A G C G T C A G C T A C A G T T A G C C G T A
Reverse Opposite:
G C A T A T C G G T C A C A G T C A G T A T C G T C A G A G T C C A G T A C T G A T G C A G T C G T C A
p-value:1e-18
log p-value:-4.266e+01
Information Content per bp:1.559
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif8.21%
Number of Background Sequences with motif354.5
Percentage of Background Sequences with motif0.82%
Average Position of motif in Targets50.1 +/- 21.5bp
Average Position of motif in Background50.7 +/- 30.2bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:1
Score:0.76
Offset:1
Orientation:forward strand
Alignment:KGSCHGYCAATCA
-GSCTGTCACTCA
 C A G T T C A G T A C G T G A C G T C A A C T G A G T C T A G C G T C A G C T A C A G T T A G C C G T A
A C G T C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:2
Score:0.75
Offset:2
Orientation:forward strand
Alignment:KGSCHGYCAATCA-
--SCTGTCAVTCAV
 C A G T T C A G T A C G T G A C G T C A A C T G A G T C T A G C G T C A G C T A C A G T T A G C C G T A A C G T
A C G T A C G T T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.75
Offset:2
Orientation:forward strand
Alignment:KGSCHGYCAATCA-
--NCTGTCAATCAN
 C A G T T C A G T A C G T G A C G T C A A C T G A G T C T A G C G T C A G C T A C A G T T A G C C G T A A C G T
A C G T A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

PH0141.1_Pknox2/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---KGSCHGYCAATCA
AAGCACCTGTCAATAT
 A C G T A C G T A C G T C A G T T C A G T A C G T G A C G T C A A C T G A G T C T A G C G T C A G C T A C A G T T A G C C G T A
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T

MEIS2/MA0774.1/Jaspar

Match Rank:5
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:KGSCHGYCAATCA
--GCTGTCAA---
 C A G T T C A G T A C G T G A C G T C A A C T G A G T C T A G C G T C A G C T A C A G T T A G C C G T A
A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T A C G T

PH0140.1_Pknox1/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---KGSCHGYCAATCA
AAAGACCTGTCAATCC
 A C G T A C G T A C G T C A G T T C A G T A C G T G A C G T C A A C T G A G T C T A G C G T C A G C T A C A G T T A G C C G T A
C G T A C T G A T G C A A T C G C T G A A T G C T G A C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G A C T G A C

PH0105.1_Meis3/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---KGSCHGYCAATCA
AATTACCTGTCAATAC
 A C G T A C G T A C G T C A G T T C A G T A C G T G A C G T C A A C T G A G T C T A G C G T C A G C T A C A G T T A G C C G T A
C G T A C T G A C G A T A C G T C T G A A T G C G A T C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G C A G T A C

MEIS3/MA0775.1/Jaspar

Match Rank:8
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:KGSCHGYCAATCA
--CCTGTCAA---
 C A G T T C A G T A C G T G A C G T C A A C T G A G T C T A G C G T C A G C T A C A G T T A G C C G T A
A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---KGSCHGYCAATCA-
NNNCAGCTGTCAATATN
 A C G T A C G T A C G T C A G T T C A G T A C G T G A C G T C A A C T G A G T C T A G C G T C A G C T A C A G T T A G C C G T A A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

PH0170.1_Tgif2/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---KGSCHGYCAATCA
AACTAGCTGTCAATAC
 A C G T A C G T A C G T C A G T T C A G T A C G T G A C G T C A A C T G A G T C T A G C G T C A G C T A C A G T T A G C C G T A
G C T A C G T A A T G C A G C T C T G A A T C G G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A T A G C