Information for 5-GTCCCGCCTC (Motif 2)

C T A G A G C T T G A C A T G C A G T C A C T G A T G C A T G C G A C T G T A C
Reverse Opposite:
C A T G C T G A A T C G A T C G T G A C A C T G T A C G A C T G T C G A G A T C
p-value:1e-24
log p-value:-5.721e+01
Information Content per bp:1.699
Number of Target Sequences with motif130.0
Percentage of Target Sequences with motif38.12%
Number of Background Sequences with motif6448.2
Percentage of Background Sequences with motif14.97%
Average Position of motif in Targets50.0 +/- 27.3bp
Average Position of motif in Background49.1 +/- 36.4bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.23
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SP2/MA0516.1/Jaspar

Match Rank:1
Score:0.86
Offset:0
Orientation:forward strand
Alignment:GTCCCGCCTC-----
GCCCCGCCCCCTCCC
 C T A G A G C T T G A C A T G C A G T C A C T G A T G C A T G C G A C T G T A C A C G T A C G T A C G T A C G T A C G T
A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

SP1/MA0079.3/Jaspar

Match Rank:2
Score:0.81
Offset:0
Orientation:forward strand
Alignment:GTCCCGCCTC-
GCCCCGCCCCC
 C T A G A G C T T G A C A T G C A G T C A C T G A T G C A T G C G A C T G T A C A C G T
A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C

E2F6/MA0471.1/Jaspar

Match Rank:3
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--GTCCCGCCTC
NCTTCCCGCCC-
 A C G T A C G T C T A G A G C T T G A C A T G C A G T C A C T G A T G C A T G C G A C T G T A C
A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C A C G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:4
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-GTCCCGCCTC-
TTTCCCGCCMAV
 A C G T C T A G A G C T T G A C A T G C A G T C A C T G A T G C A T G C G A C T G T A C A C G T
C G A T G A C T A C G T A T G C A T G C A G T C A C T G A T G C T A G C G T A C T G C A T G A C

PB0164.1_Smad3_2/Jaspar

Match Rank:5
Score:0.78
Offset:-3
Orientation:forward strand
Alignment:---GTCCCGCCTC----
TACGCCCCGCCACTCTG
 A C G T A C G T A C G T C T A G A G C T T G A C A T G C A G T C A C T G A T G C A T G C G A C T G T A C A C G T A C G T A C G T A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:6
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:GTCCCGCCTC
TTCCCGCCWG
 C T A G A G C T T G A C A T G C A G T C A C T G A T G C A T G C G A C T G T A C
A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G

Sp1(Zf)/Promoter/Homer

Match Rank:7
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-GTCCCGCCTC-
GGCCCCGCCCCC
 A C G T C T A G A G C T T G A C A T G C A G T C A C T G A T G C A T G C G A C T G T A C A C G T
T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

E2F4/MA0470.1/Jaspar

Match Rank:8
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--GTCCCGCCTC
NNTTCCCGCCC-
 A C G T A C G T C T A G A G C T T G A C A T G C A G T C A C T G A T G C A T G C G A C T G T A C
A G T C A G T C A G C T A G C T A T G C A T G C A G T C A C T G A T G C A T G C T G A C A C G T

POL003.1_GC-box/Jaspar

Match Rank:9
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--GTCCCGCCTC--
NAGCCCCGCCCCCN
 A C G T A C G T C T A G A G C T T G A C A T G C A G T C A C T G A T G C A T G C G A C T G T A C A C G T A C G T
G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--GTCCCGCCTC
NYTTCCCGCC--
 A C G T A C G T C T A G A G C T T G A C A T G C A G T C A C T G A T G C A T G C G A C T G T A C
T A G C A G C T G A C T A G C T A T G C T G A C T A G C C A T G A T G C A T G C A C G T A C G T